Choristoneura fumiferana (eastern spruce budworm): 141439452
Help
Entry
141439452 CDS
T11020
Symbol
SIDL
Name
(RefSeq) SIDL trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141439452 (SIDL)
Membrane trafficking [BR:
cfum04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
141439452 (SIDL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
Ig_TRAPPC10
TRAPPC10
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
141439452
NCBI-ProteinID:
XP_073959839
LinkDB
All DBs
Position
20:complement(6321663..6340699)
Genome browser
AA seq
1178 aa
AA seq
DB search
MKGVNNSPADREGMTNKPIVTCAGDWNLFCTLEAPLVAAIPQDSCEWRRSYGRVTKSVYL
EASFIKYNKDKVQSDLNLLKRPILHIYWTDCVDIEYYKTTLREDIEIWFKELEKKGITDW
MIIQVETYDIRKTNKLLPRTTVLDKIKGDFAVKQTEDRFISVINPIKSEARSAESWRALV
AKMRHFVLVAYNKALIKFEEHMREQREKRNEPEWDFCKYFILQEQLAFVLEMLGLYEEAL
VQYDELDALFSQFVLNSNVTEGPQWLETFKQPVTSWQAVRLTALVPQHLRELIIKKKASL
LDFRSYLFQRQSAMLLLMFKPWEIASRCLSTVHNTLVELSLLGATAVEGASACWAQLACA
ETLRACERLTASNSALEMCTAMQAPLLHNAKDKLHELGKLCGLLPGSPEPTSEQLHLVVM
LSAGMGDSEANNQHPTPTDRLKEALCSKTCFQQYYLELAELAMGTYKHIGRLRFARLIGR
DLAAFYSELGETGKAVVFLMDALRSYEEQGWKDLAAQTRLELVAAAKKMEDVDRYTKLSA
TIACTAELEILVRNFYFEEMMNSIRDNLSQKPEPVLTELNDCFKIVSATLLPSERGVYIT
DNKVQCCLVVESNMPRDITCTRAAISIEVFKIDKVEKRTPAKSYKTDISVNNNIGSQNNS
PRKTAPDENELPNLISSIRLDDLKPKNPLLNPLHITSQLHYKEDKTLQKATVECITPKVT
LKRSDSSKYRKPSATLRNNYENAFTCVNFTLKPGSNEIILECIAKAPGTFKIGQVSLLIE
EKLEFLSNALISTKVGYDVVIQGVNVYLNKVEPKKDLVAGLEQAMELVVTSGSSFIQEDA
TIILKTSTGLTIRRAEGDSPKVRELAIPVPACRPFETTRVPLKLFSGLQVKKEKSVEHTV
WLNCPWWEAAMEVPLHFSPPMVASWRLLTSNTRKFVHVTLKSTVAHLIQFELTEPKLECD
GNTTVSDLNPKNAKDMTVASDGTTASFMWELLKDPLVKAGPMKATFTVQYKPIGTDEPSR
NFICPFDIQDCTTLFVIRTKLEPSKGTDFCRASQVCCLQLSVQRVNETEFTSLMYEVLAD
QTMWAVLGRTAGVITMESNTAEAQSVTLDVMPLVAGYLPLPTVRLSKYIAANTKDPKKDI
SAHPRLEPFSPGQVYHAGKAKQVHVLPPMAKEHLDPAL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggtcaataattcgccagccgatcgcgaaggcatgaccaataaacctattgta
acatgtgctggggactggaacttgttttgcacgttagaagctcccctagtggctgcaatc
ccacaagactcctgtgaatggaggcgatcttatggtcgagttaccaagtctgtttacttg
gaagcatctttcatcaaatacaataaggataaagtgcaatctgatcttaatctactgaag
agacccatcttacatatatattggactgattgtgttgatatagaatattacaagaccaca
ctcagagaagatattgaaatatggttcaaggaattagaaaaaaaaggcataacagactgg
atgattattcaagtagaaacttatgatattcgtaaaaccaacaagcttttacctagaact
actgtattagataaaataaagggagattttgcagtaaaacaaacagaagataggtttata
tctgttattaatccaataaaatctgaagcccgaagtgcagaatcatggagagccttagtt
gccaagatgaggcactttgtgcttgtggcctacaacaaagctttgataaaattcgaagag
cacatgagagagcagagggaaaagagaaatgagccagaatgggacttttgtaaatatttt
attttgcaggaacaactagcatttgtattagaaatgttaggtttgtatgaagaagcgtta
gtgcaatatgatgaattagacgctttattctctcaatttgtgctcaattccaatgtgacg
gagggtccacaatggcttgaaacattcaagcaacctgttacatcatggcaggcagtcaga
ctgactgcattagtgccgcagcatttgagggagcttattattaagaagaaggcttctctg
ctggattttaggagctacttgtttcagcgtcaaagtgccatgttattgcttatgtttaaa
ccgtgggagattgcgtcccgctgcctcagcaccgtccataacactctagttgagctgtcg
ttgctgggcgcaacagccgtggagggcgcgtccgcgtgttgggcgcagctggcatgcgcc
gaaactctaagagcttgcgaacgccttacagcgtcgaactcggcgctggaaatgtgcacg
gcaatgcaggcaccattactgcacaatgccaaggacaagctccacgagcttggcaagctg
tgcggtctactaccaggctctccagagcccacatcagaacagctccatctggttgtgatg
ctgtcagccggtatgggagacagtgaagctaataaccaacaccctacgcctacggataga
ctgaaggaagcgctgtgcagtaagacctgcttccagcagtattacttggagcttgccgaa
ttagcaatggggacctataagcatattggaaggttaagattcgcgcgcctcattggtcgt
gatctggccgcgttttactcagagcttggggagacgggcaaagccgtggtgttcctcatg
gatgcactacgatcttacgaggaacagggctggaaagatttagctgcgcaaaccaggctc
gagctggtggcagctgccaagaaaatggaagatgtcgacagatatacaaagctctctgca
acaatagcgtgcactgccgaattagaaatcctagtcagaaacttctactttgaagaaatg
atgaattcaatacgggataacctgtcacagaaaccagaaccagtgttaacggagctcaac
gattgcttcaaaatagtttcagcaacacttctgccgtccgaacgtggtgtttacatcact
gacaataaagtccagtgttgcttagttgtggaaagcaatatgcctagagatattacttgt
acccgcgcagcgattagtatagaggtgtttaaaatcgataaggttgagaaacgaactccg
gctaaaagttataagactgacataagtgttaataataatataggctcgcagaataattcg
ccaaggaaaactgcgcctgacgagaatgaattacctaatttaatttctagtataagactg
gacgatttaaaacctaagaatcctctactaaaccccttgcatataacctctcaactccac
tacaaagaagacaagacattacaaaaagccacagtcgaatgcatcaccccgaaagtcacg
ctcaaaagatcggatagcagtaaataccgaaaaccgtccgccactttaagaaacaactat
gaaaatgcttttacatgtgtcaattttacattaaaacctgggtcaaatgagataatccta
gaatgcatagccaaagctccgggaacttttaaaattggccaagtttctttgcttatagag
gaaaaattagagtttttatccaatgcgctgattagtactaaagtgggatatgatgtggtg
atacaaggggtgaacgtttatttgaataaagtcgagcctaaaaaggatttggtggcaggg
ttggaacaagccatggagttggtggtgacgagtggtagctcttttatacaggaggatgcg
acgatcatcctaaaaacatcaacaggccttaccatccgtcgcgccgaaggagattccccg
aaggtacgggagctggccataccggttccggcgtgtagaccgttcgaaacaacgcgggtg
ccactcaaactattctcgggcctgcaagtcaagaaggagaagagtgtcgaacatactgtc
tggctaaactgtccctggtgggaggcagcgatggaagtgcctctgcatttctcccctcca
atggtggcgtcatggcggctattgacctcgaacaccaggaaatttgtgcacgtcactctc
aagtcgacggtcgcccatctcatacagtttgaattgacggagcctaagttggagtgcgac
ggcaatactaccgtgtctgatctgaatccgaaaaatgccaaagatatgacggttgcctca
gatggcacaacagcgtcattcatgtgggagcttttaaaagatcctttagtaaaagcgggt
ccaatgaaagccacattcacagtacagtacaagcctattggaacagacgaaccttccaga
aactttatctgtccgtttgatatccaagactgtaccactctatttgtgatcaggacgaag
ctggagccgagcaaagggacagacttttgcagggcttcgcaggtctgctgtctgcaactt
agcgtgcaaagggtgaacgaaacggaatttacttcactcatgtacgaagttttagcggat
caaacaatgtgggctgttttgggaagaactgctggagtaataacaatggagtcgaataca
gcggaagcgcaaagcgttactttggacgtgatgccgctagtcgcggggtatctcccgctc
cccacagtccggctttccaagtacatcgcggctaataccaaagatccaaagaaagatatc
tcagcacacccgcgcctagagccgttcagtcccgggcaagtttaccacgcgggcaaagcg
aaacaagtgcacgtattgccgcccatggccaaggaacacctagacccagcactctga
DBGET
integrated database retrieval system