Choristoneura fumiferana (eastern spruce budworm): 141439491
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Entry
141439491 CDS
T11020
Symbol
Snx27
Name
(RefSeq) sorting nexin 27 isoform X1
KO
K17936
sorting nexin-27
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141439491 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
141439491 (Snx27)
Membrane trafficking [BR:
cfum04131
]
Protein recycling
Others
Others
141439491 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
141439491 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
Sina_TRAF
SNX17-31_F2_FERM
FERM_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
141439491
NCBI-ProteinID:
XP_073959869
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All DBs
Position
21:complement(642808..710937)
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AA seq
526 aa
AA seq
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MAETETDNNSIIRPERNSKGTTATNGPRRVTIYKTDTGFGFNVRGQVSEGGQLRSINGEL
YAPLQHVSAVLEQGAAEQAGIRKGDRILEVNGVNVEGSTHKQVVDLIKSGGDCLTLTVIS
VTPKEAERLEPCDDGSAPVGVIGGAANSRATVYQRYDYTDKRSLPVSIPDYRVVMERNTG
RSFVAFNVHMAGRHLCSRRYREFAVLHQQLRKEFLGFNFPKLPGKWPFTLSEQQLDARRR
GLEQYLEKVCAVRVIAESDAVQEFLTDSDDSSNPSPVDLKVLLPDKEVVTVSVLKSTNAD
DVYRAVCEKIGLSKSVQKYFYLFEIVEYNFERKLQPNECPHSLYIQNYSTASSSCLAIRR
WVFSPQREAAVCADPTAAAFIFWQAVEDVNRGVCVAGARLYQLKALQDVRRAADYLALAR
TLPGYGDVAFPPLRSDACPTPTLNVAVGWSGLKLTACAESAPAQTAEIPWRLVREWRADD
DAAAARLTYTAHHHTTTIALYTPVYQFLCNCMDRIAEEMSWVDTGD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacagaaactgataataacagtattattagacctgagagaaatagtaaaggt
acaacggctaccaatggaccccgtcgcgttactatctataaaactgatactgggtttggt
tttaatgtgcgcggtcaagtgtccgagggtgggcagttgaggtcgatcaatggggagctt
tatgctcctttgcagcacgtcagcgctgtcttggagcaaggagccgcggagcaggccggg
atcaggaagggagacaggatcctagaagtaaatggtgtgaacgtggaaggatccacccac
aagcaagtggttgacctgatcaagtccggaggggactgcctcactctcacagttatctct
gtcacgcccaaggaagcggaacgtctggagccatgcgacgacggctcggccccagtgggt
gtaatcggcggcgcggccaactcccgcgctactgtctaccagcgctacgactataccgac
aagcgctcgctaccggtctccataccggactaccgggtcgtcatggagcggaacaccggc
cggtcattcgtggccttcaacgtccacatggctggaaggcatctctgcagccggcggtac
cgcgagtttgctgtgctgcatcagcagttgcggaaggagttccttgggttcaacttcccg
aagttgccgggcaagtggccgtttacgctgagcgagcagcaactggacgcgagacggaga
ggtcttgaacagtatttggaaaaggtatgcgcagtacgagtgatcgccgaatctgatgct
gtgcaagagttcctcactgattccgacgactcttctaacccgtcgcctgttgatttaaag
gtgctgctccctgacaaggaagtggtaacggtgtccgtgctaaagtcgacgaacgccgac
gacgtgtaccgcgctgtatgcgagaagataggactctccaaatcggtgcagaagtacttc
tacctgtttgaaatcgtcgagtacaatttcgaacgcaagctgcaacctaacgagtgtccc
cactcgctgtacatccagaactattcgacggcgtcgtcgtcctgcctcgctatccgtcgc
tgggtgttcagcccccagcgggaagccgccgtctgcgcagatcccaccgccgccgccttc
atcttctggcaggcggtggaagacgtgaaccgcggcgtgtgcgtggcgggcgcgcggctg
taccagctgaaggctctgcaagacgtgcgacgcgccgcggactatctcgcgctcgctcgc
acgctgcccggctacggggacgtcgccttccccccgctcaggagcgacgcctgtcccact
cccacgctcaacgtcgctgttggctggagcggtctgaagctgacggcgtgcgcggagtca
gcgccggcgcagaccgccgagataccgtggcggctcgtgcgcgagtggcgcgccgacgac
gacgccgccgccgccaggctcacatacaccgcgcaccaccacaccaccaccatcgcgctc
tacacgcccgtgtatcaattcctttgcaactgcatggacagaatagccgaggaaatgagc
tgggtcgacaccggcgactaa
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