Choristoneura fumiferana (eastern spruce budworm): 141439744
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Entry
141439744 CDS
T11020
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141439744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141439744
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
GTPases
141439744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
MMR_HSR1
EFG_IV
SRPRB
Motif
Other DBs
NCBI-GeneID:
141439744
NCBI-ProteinID:
XP_073960212
LinkDB
All DBs
Position
21:complement(10194029..10325549)
Genome browser
AA seq
1066 aa
AA seq
DB search
MRLVDGSKLLELQNTPANIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSR
PDEQERGITMKSSSIALYHAVEHNEYLVNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVV
EGVCPQTRLALKQAYLENIQAVLVLNKIDRLILEMQMTPLDAYVHLNQVMEQVNAVMGEL
FATGVFENEETQIDKQELKEKSKEDNNFYDWTSALEDADDSNLYFSPEQGNVVFASAIDG
WGFTIHTFARLFSEKLGVKEELLKKVLWGDFYLNSKTKRFMKGAQEKAKKPLFVQLVLDN
LWNVYETIAIRHEKEKVPVICEKLGIKLTTRDLRHTDSRIQLQSLMMQWLPLSQTVLNMV
CSKLPSPKEISLDKVEKLMCTKIVDFESLHPKTQELKNDFLACDNGPERPLIVYISKMFS
VDKSVLPENKPKALTVEEMALRRDKARQMREQMKANEGNSEAVPMSEDKKTEIDTPEKSY
EDEKEKEVDQPAFIAFARVFSGRLKKGDKVYVLGPKHDPSRILSIKDYEIDPNKKLKDLQ
SDEHITCTEIRSLYILMGRELEEIEEAVAGNIIGIGGLEEHVLKTATLSTSVACPAFSEL
QSAAVPILRVALEPSNPSQLSQLVKGLKLLNQSDSCVQVLLQETGEHVIVTAGEVHLERC
LEDLKNSYAKIPIIVSEPIVPFRETIIVPPKIDMANEEIDSQNIDKGDTEIDPVITVHTN
NKQSKIKIRAKPLPNEITALLDKSTDLLKAISQHIKSLQGSSKNENLENKFDNLHINGTH
ELSDRMLKLIETFTEELKTICSKLGPEWSKVPEQIWSVGPRNCGPNLLLNQTSDYVTKFL
YHKKEIKEDPRFEYEGSFVNGFQLASFSGPLCEEPMMGVAFCVEEWTLDKSDGDDAGHTF
GPLSGQIMSAVKDGCRKAFQVQPQRLMAAMYSCDIVVDQKVLGKLYAVLGKRGGRVVGSD
LQTGSASFRVQALLPVAESFRFALELRTNTSGLAAPQLLFSHWEVIEIDPFWRPRTEEEY
LQWGEKWDGVNRAKAYMDSVRARKGLATDKHLVQHAEKQRTLSKKK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggtagacgggtcgaaacttttagaacttcaaaacacacctgcgaatattcgt
aatatttgcatcgtggcgcacgtggaccatggaaaaactactttagcagattccttgata
tccagtaatggcattatatcgcagaggatgtctggtaagctgcgctacatggacagcagg
ccagatgaacaggagaggggtataactatgaaaagtagcagcatagcgctgtatcatgcc
gtagaacataatgaatatctcgtaaatctcatagattcacctggacatgttgatttctca
agtgaagtgtcaactgctgtaaggctgtgcgatggagctattgttgttgtagatgtagtg
gaaggagtctgtccgcagacaaggttagctttgaagcaggcatacttggagaacatccaa
gctgtgttagtactcaataaaattgacagattgatattagagatgcagatgacaccgtta
gatgcgtatgtccatctgaatcaagtaatggaacaggtcaatgctgtgatgggagaactc
tttgccacaggagtgtttgaaaatgaggaaacgcagattgataaacaggagttgaaagag
aaatccaaagaagataacaatttctatgactggacttcagctttggaagatgccgatgat
tccaacctctacttttcaccggaacagggcaatgttgtgtttgcgagcgctattgacgga
tgggggtttaccatccatacatttgcaagacttttctctgaaaaacttggagtaaaagaa
gagttgcttaaaaaagttttatggggtgatttttatttgaactcaaaaacgaaacgcttc
atgaaaggcgcacaagaaaaggctaagaagccactgtttgtgcaactagtactagataac
ttgtggaatgtctacgaaactatcgccataaggcatgagaaggaaaaagtaccggttata
tgtgaaaagctcggcataaaactcactacaagggatttgagacatacagatagtagaatt
caactccagtcactcatgatgcagtggctccctctgtcgcaaacagtgttaaacatggtc
tgttcgaaactaccttcacctaaagaaatttcgctggataaagtggaaaaacttatgtgc
acgaagatagtcgactttgagtccctccatcctaaaacacaagaactgaaaaatgacttt
ttagcctgtgataatggtcctgagagacctcttatagtgtatatatcgaagatgtttagt
gtagataaaagtgtgcttccagagaataagccaaaggctttgacagttgaggagatggct
ctcagaagggataaagctagacaaatgagagaacaaatgaaggccaatgaaggcaattca
gaagctgtccctatgtctgaagacaaaaaaactgaaatagatactccagaaaaaagttat
gaagatgagaaagagaaagaagtagatcagccagcatttatagcatttgctagagttttt
agcggtaggttaaaaaaaggcgacaaagtctatgtcttaggtccaaaacatgacccgtcc
agaatattaagtataaaggactatgaaatagatcctaataaaaagttaaaggacctacaa
agtgatgaacatatcacatgcacagaaattagatctttgtacattttgatgggaagagaa
ttagaagaaattgaagaggctgttgctggcaatatcataggcattggtggcttagaagag
catgtccttaaaacggctactcttagtaccagcgtcgcttgccctgcgttcagtgaactg
caatcagcggctgttcccattttaagagtggcattagaaccatccaatccttcgcaactg
tcacagttagtcaaaggtttgaagcttctcaaccaatcagattcttgcgtacaagttctt
ttgcaagaaactggtgaacacgtcattgtaacagcaggagaagtccacctcgaaagatgt
ttagaagacttaaagaatagctacgcgaaaattcctatcattgtttcggaacctatcgtt
cccttcagagaaacaattatagttcctcccaagatagacatggccaacgaagaaattgac
tctcaaaacatcgacaaaggcgacacagaaatcgacccagtcatcaccgtgcacactaat
aacaaacaaagtaaaatcaaaatacgagctaagcctctccccaatgaaataacagctctc
ttagataaatccaccgatttactcaaagccatatcccagcacataaaatcactgcagggt
tcgtcgaaaaatgaaaacttggagaataaatttgataatttacacataaatggtactcac
gagctgtcagaccgtatgttaaagttgatagaaactttcactgaggagctcaaaaccata
tgctccaaattgggtccagagtggagcaaagtcccggaacaaatttggtcagttgggccc
aggaattgtggccccaacttgcttcttaatcagacgtcggattacgttacgaagttttta
tatcataaaaaagaaattaaagaggatccaagatttgaatatgaaggtagttttgtaaat
ggtttccaactggctagtttctcgggacctttgtgcgaggagcctatgatgggtgtcgct
ttttgtgtcgaagagtggacactggataagagcgacggcgacgacgctggacatacattt
ggaccgctgtcaggtcaaatcatgtcagctgtaaaggatgggtgcaggaaggcgttccag
gtgcaacctcaaagattgatggcagccatgtactcctgcgacattgtcgtcgaccagaaa
gtattaggcaagctctacgcggtgctaggcaagcgcggtggacgagtggtcggtagtgac
ctgcagaccggctctgcgtcgttccgagtgcaagcccttctgccggtcgccgagagcttc
cgcttcgctcttgaactgcgcaccaacacttctggcctggctgcgccgcagctgctgttc
agccattgggaggttatagaaatagacccattctggcgtccacgtaccgaggaagaatac
cttcagtggggtgagaagtgggatggcgtcaaccgagcaaaagcttacatggactcagtg
cgagcgaggaaaggccttgcaacagacaagcatctagtgcagcatgccgagaagcaacga
acgctctccaagaaaaaatag
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