KEGG   Choristoneura fumiferana (eastern spruce budworm): 141439993
Entry
141439993         CDS       T11020                                 
Name
(RefSeq) uncharacterized protein
  KO
K12602  WD repeat-containing protein 61
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03018  RNA degradation
Brite
Messenger RNA biogenesis [BR:cfum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     141439993
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_SCAP eIF2A Cytochrom_D1 Beta-prop_VPS8 Beta-prop_NWD2_C Ge1_WD40 WD40_RFWD3 Beta-prop_EIPR1 PROPPIN WD_LRWD1 PEP5_VPS11_N WD40_like WDR54 Beta-prop_LRRK2 KNTC1_N Pep3_Vps18 RMC1_N PQQ_2 B-prop_COPA_B_2nd Lactonase VPS11_N Beta-prop_Nup120_160 DUF6528 MutL
Other DBs
NCBI-GeneID: 141439993
NCBI-ProteinID: XP_073960552
LinkDB
Position
21:11805653..11810447
AA seq 326 aa
MDFVYKNSNFDHRYSILLKKEGAHNDPIYCCAWTKTHTTEDKKVPAKDFIATGGLDGLVK
VWLFENNKLELVHTLEEHSMAVVSVAISKDGHTLASTSLDSSLIIWDLLSGNKVHTIQNT
STDVWKVAFSPDGSQIVTGSHTGKLYVYGIEKATLDKVLDTRGRFVLSVAWSPNKKYIAS
GSTDGVVCLLDAEQGKLLHTIQAHTAAVHSVAFSPDSRLVITASADGNVNMYNVASASAQ
GSAQLKSWAMAACFSGDGARAAAARADGSVRVALTGKLQELKVFKEHSGSVCGLQFNAEG
NRLLSVSKDCCINIYDCPIPPKEAKK
NT seq 981 nt   +upstreamnt  +downstreamnt
atggactttgtttacaaaaactctaatttcgatcacagatattccatattgcttaaaaag
gaaggtgcacacaatgaccccatttattgctgcgcttggactaaaacacacaccactgaa
gataaaaaggtacccgcaaaagatttcatagcaacaggaggcctagatggactagtaaag
gtgtggctgtttgagaacaacaagctggagctagtccacacactggaggaacactctatg
gctgttgtgtctgtagccatcagcaaagatggccatactcttgcaagcacatcattggac
tcgagcctgataatatgggatttgctttccggtaacaaagtccatacaattcagaatact
agcacagatgtctggaaagtagccttctctcccgatggcagccaaatagtcaccgggagc
catacagggaagctttatgtctatgggattgagaaggctactttagataaagtactagat
acgcgaggaagatttgtgttgagtgttgcttggagccccaacaaaaaatacatcgcgagc
ggctcaacagatggcgttgtgtgtctcttggacgcggagcagggcaaactgctgcacacc
atacaagctcatactgcggccgtgcatagtgtagctttctcgcccgactcgcgccttgtt
atcactgcctcggccgatgggaatgtcaacatgtataatgtggcaagcgcgagcgcgcaa
ggctcagcccagctgaagtcgtgggcgatggcggcgtgtttctccggcgacggcgcgcgg
gcggcggccgcgcgcgccgacggctccgtgagggtcgcgttaaccgggaagttgcaggag
ctgaaagtgttcaaggaacatagcggctcggtatgcggtttgcaatttaacgcggaaggt
aacaggttactgtctgtttctaaagactgttgtattaatatttatgattgtccaatacca
ccgaaagaagcaaagaagtaa

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