Choristoneura fumiferana (eastern spruce budworm): 141440055
Help
Entry
141440055 CDS
T11020
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13096
splicing factor 4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141440055
Spliceosome [BR:
cfum03041
]
Complex A
Other components
Complex A specific factors
141440055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
Surp
Motif
Other DBs
NCBI-GeneID:
141440055
NCBI-ProteinID:
XP_073960626
LinkDB
All DBs
Position
21:10091684..10109431
Genome browser
AA seq
968 aa
AA seq
DB search
MPSTCTVLSWKMDNKNKSALSTRWAQMSKQEQIIERKKMEIQAKLEAQKQAAAMAAQAKL
TIPTSKDDKSSSNIFSNDGSFMSQYKALLEKQKQDKEDKERQANQEEAKAMAANAPEIYQ
EQHERDDDHKEHQNREHNERRRSSDKGRDRRRWNDRGRNRPHSPGTPVMEDRRKENKIQP
LMQIPFMPQSDPDNEANWQANGDPGTDGGSDSEQGMNYPDSNMGPGFNQGPHNMGPRPMM
MGPGMNMGPGPNMGPGPHMGPGPNMGPGPNMGPVPNMGPGPHMGPGPNMGPGPNMGPGPN
MGPGPNMGPGPHMGPGPHMGPGPNMGPRPNMGPGMNMNHGHSMGPGPNMGPGPMMGPGGP
NMPPMPPGGPMPPGGPMPPFMGGPHNYPVPPNFMGPNGPGGPCGPGPMPPNMCGPGPNGP
MPPFFGPPFPNPSMMRPNGPPNQMMPPNSMNNGNMPFMGRPPFGPNGPNFRNGNCPPNMP
FMPPNSMPPNMPPNMPPNSMPLHNIPEPKPLDSMPEQMKMPKIPPPPPLMNLSSSSQEMD
PTNRSAPNQVLSADAMPPSVQRAASEVARNGDHWENVLKAIHSQDQNMWFLHNTNSNEYK
AFRELVNKIRREGPEDKKPEVKPEDKYEPEFCLEDDYDSGDDSKTADQKFSFSDSNSQQP
WNQFNYENSVKREEASSQSDEDAESKQERRKRKKKSRWGDEPPLADIKPPGLVAPLPPGM
PPMPPMPPMPAVKLAKIDEDGLKLTTVNRNNQALMQYAMTNFGTTNLSPEDWKKCEDNFK
LNLLFQDMLKKRQEVERLAASGKHKYEYDSDEDTAEGTWEHKLRAREMYATEKWADELTK
QAAGKHHIGDFLPPEELKKFMEKYSAVKSGKEPDLSDYKEFKLKEDNVGFKMLQKLGWSE
GQGLGAEGTGIVDPINKANQPVANMGLGASGSDNVSPDDDEFDAYRKRMMLAYRFRPNPL
NNPRRPYY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtacctgtaccgtactgagttggaaaatggacaataagaacaaatcggcgctc
agtacaagatgggctcaaatgtcgaagcaagaacaaataatagaacgaaaaaaaatggaa
atacaggcgaaattagaggctcaaaagcaagctgctgctatggcggcgcaggctaagcta
acaatccctacgtcaaaggatgacaaaagctcatctaacatcttctcaaatgatggcagc
tttatgagtcagtataaggctttgctagagaaacaaaagcaagacaaagaagataaggaa
aggcaagcaaaccaagaagaagccaaggctatggcagctaatgcacctgagatttatcaa
gaacagcatgaaagggatgatgatcacaaggagcatcaaaatcgtgaacacaatgagaga
aggcgatcttctgataaaggaagggacaggcgtaggtggaatgatagaggaaggaaccgg
ccccacagcccaggaacacctgttatggaagaccggagaaaagagaataaaatacaacct
cttatgcaaataccatttatgccacaaagtgaccctgataatgaagcaaattggcaagca
aatggggatcctggtactgatgggggttcagattcggaacaaggcatgaactaccctgat
tctaatatgggcccagggtttaatcaaggtccgcataacatgggacctaggccaatgatg
atgggtcctggtatgaatatgggtccaggtcctaatatgggccctggacctcatatgggt
cctggcccgaatatgggccctggtccgaatatgggccctgttccaaatatgggccctggc
ccacatatgggacctggtccaaatatgggccctggtcctaatatgggtcctggtcctaat
atgggtccaggtccaaatatgggtcctggaccgcatatggggcccggaccacatatgggg
cctggtccaaacatggggccgagacccaacatggggccgggtatgaacatgaaccatggc
cacagcatggggccggggccaaatatgggccctggaccaatgatgggacctggtggaccc
aacatgccaccaatgccaccgggaggtcctatgccaccaggggggcccatgcctccattt
atgggtggaccacataactaccccgtgccacctaactttatgggacccaatggccctggt
ggaccctgcggacccggtcccatgccacctaacatgtgtggcccaggaccaaatggtccc
atgcctccgttctttggcccacctttcccaaacccatcaatgatgagacccaatggtcca
cctaaccaaatgatgccaccgaattctatgaacaacggcaatatgcctttcatggggcgt
cctccattcgggcctaatgggcctaactttagaaacggaaattgcccgccaaatatgccg
tttatgccaccaaactccatgccaccaaatatgccaccgaatatgcctccaaacagcatg
cctctacacaatattccggagcccaagccgctggattcgatgccggagcagatgaaaatg
ccgaaaattccaccacctccaccacttatgaatcttagctcgtcatcccaagaaatggac
cctaccaatcgctcagctcctaatcaagttctctctgcagatgcgatgccgccttcggtc
caacgcgccgccagcgaagttgcacggaacggcgaccactgggaaaatgtcctgaaggca
atacactcacaagaccaaaatatgtggttcctccataatacgaactcgaatgaatacaag
gcgtttcgggagctcgtgaataagatacgccgagaagggcccgaagacaagaagccagag
gtgaaacctgaagataaatatgagcctgagttttgtcttgaagatgattacgacagcggt
gacgatagcaagacagctgatcagaaatttagtttcagcgactccaattcccaacagccc
tggaaccaatttaactatgaaaactcagtaaaacgcgaggaagccagttctcaaagcgac
gaagacgctgaaagcaagcaggagaggcgaaaacggaagaagaagtcgcgttggggcgac
gaaccaccgctagcggatattaagcctccggggttggtggcgccgttgccgcctggcatg
ccacctatgcctcctatgccacccatgccagctgtaaaactggccaaaatagacgaggat
ggtctaaaactgaccacagtgaatcgtaacaaccaagctctgatgcagtatgccatgacc
aactttggcaccactaaccttagccctgaggattggaaaaagtgcgaagataacttcaag
ctcaatctgttatttcaggacatgctaaaaaagaggcaagaagtggaacgtctggcggca
tctggcaaacacaagtatgaatatgacagtgacgaagatactgctgaggggacatgggaa
cacaagctacgtgcaagggaaatgtatgccacagagaaatgggcggacgagctcacgaaa
caagcagccggcaagcatcacatcggagattttctaccgcctgaagagcttaagaagttt
atggagaaatattcggctgtaaaaagtggcaaagagccagatctgagtgactacaaagag
ttcaagttgaaagaagacaatgtcggcttcaaaatgctacaaaagctggggtggagcgag
ggacaaggtctcggtgctgaaggcaccggcatcgtcgacccaattaacaaagcgaaccag
cccgtcgcgaacatgggtttgggcgcgtccggttctgacaacgtctcgcccgacgacgac
gaattcgacgcttacaggaagcgaatgatgctggcgtaccgcttcagacctaatcccttg
aacaatccacgaagaccttattattaa
DBGET
integrated database retrieval system
