KEGG T11020: 141440224

Choristoneura fumiferana (eastern spruce budworm): 141440224

Entry

141440224         CDS       T11020

Name

(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein

K26545

ubiquitin-associated protein 2

Organism

cfum Choristoneura fumiferana (eastern spruce budworm)

Brite

KEGG Orthology (KO) [BR:cfum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfum04121]
    141440224
   03400 DNA repair and recombination proteins [BR:cfum03400]
    141440224
Ubiquitin system [BR:cfum04121]
Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    141440224
DNA repair and recombination proteins [BR:cfum03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     141440224

SSDB

Motif

Pfam:

UBAP2-Lig GIP1_N UBA_RAD5A

Other DBs

NCBI-GeneID:

141440224

NCBI-ProteinID:

XP_073960784

LinkDB

Position

22:complement(11859981..11905874)

AA seq 897 aa
MSLGARATKGGAGGAGGAAAKGKDRAPDKAKGASKPPGKDKVKQASTDHIRLTHTADRKN
DDTSDVRRMVLELMEMTCRTEEEVCSALHDSDNDMAAACNLLFEDTPRTQSEWQTSEKKK
KKPPAAAGNGEPEPPRERDARDRAGPPRTRRGESDAGRGRGGAVGGAPPAAPARARPARL
HEDQPYTGNNVADSFPSAEDWDNEEWSGSLSDTKVLQQKVFTPSTSGLNAEEQPANNSTE
DWDTPAPAAAANGPTEHIPSYTYHARLPDPPRPPDMSAPHHPVSAPSETVPPADTQPRHQ
STMQPMGMSGSLSAAQSQYLSQLTQQSQRHDNSVYSSNYGVYGSSDIASQRKPQRARVPP
PSKIPSSAVEMPGGEGGAMFLDVQFGALEPEALQDAPAPPPAHPPPAPKPQPQQATPVPE
PQPVVSAHETPAEAPTNSYPTHTTNSMLPESMTTETPAAPPPAEPAAPPANNLEKQLTAA
MKQLAVSAGDAPATAPQHHRHKTVGQQNVYAPHHAVTHHPPVYGANVYAPQVNSTNASLT
GAAGMTAAAYASNATLTQYQPMINSYQTSSSAGVYAGSALYTYQPSPQTKLPTKDTPQYD
NSVASSNSLTSTSTTQTSTAKVATTTVSNAAGGGAGGAATAACTGRGGRAGRVAHYDEAQ
LLTRTMPHPMTGYYEVGYGVSGAREGTFGLGPTERFTRTDAASPQQVSQVPTALPPGYAY
FYQPPPTTYQYGVYPTYGGGSNVGGVGGVGGVGGVGSVSGGVGGAGKPTTYSQQQPAYDQ
DSYKTGGGYNANANKAAAAPPELASAMYAKTHQALNKVNSYDKATFHSGTPPPFGAGSHL
YIPAPQQHHHPHHAHQPHQMDVRVNSSHNRRESGAARAAAKPAPSKPTYSQSYWAPN

NT seq 2694 nt +upstreamnt +downstreamnt
atgagtttgggagcacgcgccaccaagggtggtgcggggggcgcggggggcgcggccgcc
aagggcaaggacagagccccggacaaggccaaaggcgcctccaagccgcccggcaaggac
aaagtcaaacaagcgtccacagaccacattcgcctgacacacaccgccgaccgtaaaaac
gatgacacgtcggacgtgcggaggatggtgctagagttgatggagatgacgtgtcgcact
gaagaagaggtttgctcggcgctgcacgactcggataatgatatggcggccgcttgcaac
ctgctctttgaggacacgccgcggacacagagcgagtggcagacgagcgagaagaagaaa
aagaagccgcccgccgccgccggcaacggcgagcccgagccgccgcgcgagcgagacgcg
cgcgaccgcgccggcccgccacgcacgcgtcgcggcgagtcggacgcgggtcgcgggcgc
ggcggcgcggtcgggggcgcgccgcccgccgcccccgcccgcgcgcgccccgcgcgcctc
cacgaggaccaaccatacaccggcaacaatgtcgcagactcgttccccagtgccgaagac
tgggacaacgaggagtggtccggatccctctctgacaccaaggtactccaacaaaaagta
ttcacgccgagcaccagcgggctgaatgccgaggagcagccagcgaacaactcgacggag
gattgggacaccccggcgccggcggccgcagccaacggtcccacggaacacatcccgagc
tacacgtaccacgcgcggctgcccgacccgcccagaccaccggacatgagcgcgccacac
caccccgtgtcggcgccgagcgagacagtgccgccggcggacacgcaaccgagacaccag
tcgacgatgcagccaatgggcatgtcgggcagcctgagcgcggcgcagtctcagtacctc
tcgcagctcacccagcagtcacaacggcacgacaacagcgtctattcctcaaactatgga
gtatatggatcgtcagacatcgcgagccagcggaagccgcagcgcgcgagagtgcctcct
ccttccaagatcccatcgtcggcggtggagatgccgggcggggagggcggcgccatgttc
ctggacgtgcagttcggcgcgctggagcccgaagcgctgcaggacgcgcccgcgccgccg
cccgcgcacccgccgcccgcgcccaagccgcagccccagcaggcgacgccggtgccggag
ccgcagccagtggtgagcgcgcacgagacgcccgctgaagcgcccaccaatagctacccc
acacacacaacgaacagtatgctcccggaaagtatgacgactgaaacgccagccgccccg
cctccggcggagcccgcggcgcctccagccaacaatctagaaaagcaattgacagcagcg
atgaaacagcttgccgtgtcagccggcgacgcgcccgcgaccgcgccgcagcaccatcga
cacaagactgtgggacaacagaatgtgtacgcgccgcatcacgcggtaacgcatcacccg
cctgtgtacggtgctaatgtgtacgctcctcaggttaactcgacaaacgcgtcactaaca
ggcgctgcgggcatgacggctgctgcgtacgcgtcgaacgcgacgctcacgcagtaccag
cctatgattaattcctatcagacgtcgtcgtcggcgggagtgtacgcgggcagtgctctg
tacacctaccagccttcaccacagactaaactacctacaaaggacacaccacagtatgac
aattcagtagcttcaagtaacagtttaacgagtacatcgacgacgcaaaccagcactgcc
aaagtagccaccaccacagtgagcaacgcggcgggcggcggcgcgggcggcgcggctacg
gcggcgtgtacggggcgtggcgggcgcgccggccgggtagcgcactacgacgaggcgcag
ctgctcacgcgcacgatgcctcaccccatgactgggtactacgaggtgggttacggcgtg
agcggggcgcgggagggtacgttcgggctgggccccaccgagaggtttacgcgcacggac
gcggcctccccgcagcaagtcagccaggtaccgaccgccctaccacccggctacgcatac
ttctaccagccaccgcctacaacataccaatacggagtttatcccacgtacggcggcggg
tcgaacgtgggcggcgtggggggcgtaggcggcgtgggcggcgtgggctcggtttcgggc
ggcgtgggcggcgccggcaagcccaccacctactcgcagcagcagcccgcgtatgaccag
gactcgtacaagacaggtggcggatacaacgcgaacgcgaacaaggcagcggccgccccg
cccgagctcgcgtccgcgatgtacgccaagacgcaccaggcgcttaacaaagttaatagc
tacgataaggcgacgttccacagcggcacgccgccgcccttcggcgccggcagccacctg
tacatccccgcgccgcagcagcaccaccacccgcaccacgcgcaccagccgcaccagatg
gatgtacgggtgaacagtagtcataataggcgggagagcggggcggcgcgcgcggcggcc
aagcccgcgcccagcaagccgacctactcgcagtcctactgggcgcccaactag

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