Choristoneura fumiferana (eastern spruce budworm): 141440349
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Entry
141440349 CDS
T11020
Name
(RefSeq) autophagy-related protein 13 homolog
KO
K08331
autophagy-related protein 13
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04136
Autophagy - other
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141440349
04136 Autophagy - other
141440349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141440349
03029 Mitochondrial biogenesis [BR:
cfum03029
]
141440349
Membrane trafficking [BR:
cfum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
141440349
Atg1 complex
141440349
Mitochondrial biogenesis [BR:
cfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
141440349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
141440349
NCBI-ProteinID:
XP_073960957
LinkDB
All DBs
Position
22:1252567..1254231
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AA seq
416 aa
AA seq
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MAPDAAFSNLSDKNEFTKFARFLAYKGVQVIVESRKGVKIEVSTKPTNTDSDWFNLQIPD
SPEVNLATKNALPSDRVLETIRSQLHVEISVQTEDEHEMVLELWTLGLDETQFDTSLKAM
NTVYFRMGILLKSLITITRITPAYHLSRKQRMEFFTIFYRVYNGEPKKKSLGDQVKNIQA
GMLKTPLGGLCFSVAYRTNFSITPNRVDKSNTLLLKSDHFELSPKHVIFECKKKKEQKEK
EFKPLKQVDLNKPLRMAAFADEDVIHEAILKFFKTIPIPKFRLRPKVEAPKDPIESKSTQ
ELDTTVISKSPTSFEMPPRKFAGFRSEHEPPLKLLHFPFADHHPIRDLAEFYKDFFNAPH
LKLAEDLAAIKSSESVKEDMETGEDLSKDLELYESSVQEFDDLLAEMCRSAEWTGN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgacgctgccttctctaacctgagtgacaagaacgaattcacaaaattcgca
cgattcttagcctataaaggggtacaggtcatagttgaatcaaggaagggagtcaaaata
gaagtgagcaccaaaccgacaaacacggactccgattggttcaacctacaaataccagac
tctccagaagtaaacttggctaccaaaaatgctttaccatcagacagagtgcttgaaacc
atacggtcacaattgcatgttgaaatttctgtccaaacggaagacgagcatgaaatggta
ctcgaactgtggaccttaggacttgacgaaacccaatttgatacttctctcaaagccatg
aacactgtttatttcaggatgggaatactcttgaagtctcttattactattacgagaata
acacctgcgtaccatctttcaaggaaacaacgtatggaattctttactatattctataga
gtatataatggggaacctaaaaagaaatccttaggagaccaagtgaagaatatccaagcg
ggaatgctaaaaacgcctttaggaggactatgtttctctgttgcgtacagaacaaatttt
tctattacgcctaatcgtgttgacaaaagtaacactttacttttgaagagtgatcacttt
gaactgagcccgaaacacgttatttttgagtgcaagaaaaagaaagagcaaaaggagaaa
gagtttaaacccttgaaacaagtggacttaaacaagccgctccgtatggcagcattcgca
gatgaagatgtcatccatgaggcaattttgaaattctttaagacaattcctatcccgaaa
ttccggctgcgtccaaaagttgaagctccgaaggaccctatagaatctaaaagtactcaa
gagctggatactacagttatttccaaaagcccaacatcttttgagatgcctccgaggaaa
tttgcagggtttcgaagcgagcatgaaccaccattgaagttgctgcactttccgtttgct
gaccaccatcccataagagacttggcggagttttacaaggactttttcaatgctccgcat
ttgaagctagcggaagatttggctgcaataaaaagttctgaatctgtaaaagaggatatg
gaaaccggtgaagatttgtcgaaggacttggagctttatgagagttctgtgcaagagttt
gatgaccttttggctgaaatgtgccggtctgcagaatggactgggaattaa
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