Choristoneura fumiferana (eastern spruce budworm): 141440848
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Entry
141440848 CDS
T11020
Name
(RefSeq) probable ATP-dependent RNA helicase CG8611
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141440848
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141440848
Enzymes [BR:
cfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141440848
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141440848
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
Helicases
141440848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PI3_PI4_kinase
Motif
Other DBs
NCBI-GeneID:
141440848
NCBI-ProteinID:
XP_073961519
LinkDB
All DBs
Position
Z:complement(9682687..9689497)
Genome browser
AA seq
703 aa
AA seq
DB search
MDDLQLNITVAKKNTKKRATQKDASEYKFMSKPAFTGKTIARKRPMHDKKNDGERQIKIP
KQSESQGPKSVDLSENLRDLSENKGKFQGKSYQDLSDDIQLKQKPRAGGWISSLFKNNPD
VPRIGQRAVRPLVEKVFAEKTFADLDIHPHSVANLQQNLGLKDLMVVQQIAVPVILQGRD
ALIRSQTGSGKTLAYALPIVEGLQAIRPKINRLDGIRAVVVVPTRELAVQTYELFIKLVK
PFTWIVPGLLSGGQKRKAEKARIRKGLSILVGTPGRINDHLRHTASLNFAKTGCLVLDEA
DRLLEMGYEKDVAAIVAAIEEHKKNATYDPLAMVKSQIKTNFQDTEEESTENSEVEDKCE
VKHHLTEVFLSKERQTTLLSATLSKAVENLAGITMVDPVFADSSEGKALVADSLKSLKEK
KEETKPGPSKTKEKPATTVKTKSVELNEDLSNTNQNDGEQDNTQDDKPGLKAFREDKSRQ
LFNVDDLSDSDSASPVPFPEETDKKKDSSKAEAVLNAPLGVVDMESDDEYVMPDEPDIAP
SYEAAVQTAINQDELVMPVSVSQSFLIVPMKLRLVTLCSLIVEHCVMNKKGGKLMVFMAT
LEMVDYHAELIETVLTGKSAKAKEKDEKKKKKTKSNKNKSNKESSDNSDSEFEIDYQAPP
EGGLVPVEMDVFKLHGSMPHEQRIEVFDQFRKAKKGVLFCTNM
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgcagttaaatataaccgttgctaaaaagaataccaagaaaagagctacg
cagaaagatgcatcggaatacaagtttatgtcgaaaccagcttttactggaaaaactata
gctagaaaaagacctatgcatgataaaaaaaatgatggcgaacgtcaaatcaaaataccg
aaacagtctgaatcacagggccctaagtcagtagatttgtcagaaaatctaagagacttg
agtgaaaacaaggggaaattccaaggaaaaagttatcaagacctcagtgatgacatacaa
ttaaaacaaaagccaagggctggtggctggatttcatcattgtttaaaaataatccagat
gttcctcgaattgggcagcgagctgtgagaccacttgttgagaaagtgtttgcagagaag
actttcgcagatttagatattcatcctcatagtgtagcaaatttacagcaaaatttgggt
ttaaaggaccttatggtagttcaacaaattgctgtccctgttatattgcaggggcgagat
gcgttaattaggtcacagactggttctggaaaaaccttagcttatgcattacctatcgtg
gaagggctgcaggcaataagaccgaaaataaaccggcttgatggcattagagcggtagtt
gtggtgcctactagagagcttgctgtgcagacttacgaattgtttattaaactggttaag
ccattcacttggatcgtccctggactcttaagtggcggtcagaaacgaaaagcagaaaaa
gccaggatacgcaaaggcctcagtatactagttggcactcctggacgtataaatgatcat
ctaaggcatacggcatctttgaattttgcaaaaacaggttgtttggtattggatgaagct
gatcgattacttgaaatgggttatgaaaaggatgtagccgccattgtagcagctattgaa
gaacacaagaaaaacgcgacctacgaccccctggctatggttaaaagtcaaattaaaact
aacttccaggatacagaagaggagtccacagaaaatagtgaggttgaagataagtgtgaa
gtaaaacatcatttgactgaagtgttcctatcaaaagagcggcagacgacattactttca
gctacactttctaaggcagtagaaaatttagctggaattacaatggtggatcctgtattt
gctgactcatcagaaggaaaagcacttgtcgctgattcgttgaagtcattaaaagagaaa
aaagaggaaaccaaaccaggtccttcaaaaactaaagaaaaaccagcaaccactgttaag
actaagagtgttgaattaaacgaagatctgagcaacactaatcagaatgacggtgaacaa
gataacacacaagacgataaaccaggtttaaaagcatttagagaagacaaatcaaggcag
ttatttaatgtagatgacttatccgattcggactcggcaagtccagttcctttccctgaa
gagactgacaagaaaaaagatagtagtaaagcagaagcggtgcttaatgcaccacttgga
gttgtggatatggagtcagatgatgaatatgttatgcccgatgaaccagacattgcacca
tcatatgaggctgcagtgcaaaccgccataaaccaggatgaactcgtcatgccagtctcg
gtgagtcagtcgttccttattgtgccaatgaagttgagactggtaacactatgctctctt
atcgtagaacactgtgtaatgaataaaaaaggagggaaactgatggtgttcatggcaaca
ttggagatggtggactatcatgcagagttgatagagactgtgctgacgggaaagtcggct
aaagcgaaagaaaaggatgaaaagaagaagaagaaaacaaaatcgaataaaaataaatca
aataaggaatcatcagacaattcagattccgagttcgagatcgactaccaggcgccgccc
gaaggcggtctggtgccagtagagatggatgtgttcaaattgcatggttcaatgccccac
gagcaaaggatcgaagtcttcgaccagttccggaaggcgaagaaaggggtgttattttgt
acgaacatgtag
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