KEGG   Choristoneura fumiferana (eastern spruce budworm): 141440890
Entry
141440890         CDS       T11020                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03018  RNA degradation
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141440890
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141440890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfum03019]
    141440890
   03041 Spliceosome [BR:cfum03041]
    141440890
Messenger RNA biogenesis [BR:cfum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141440890
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     141440890
Spliceosome [BR:cfum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    141440890
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 141440890
NCBI-ProteinID: XP_073961576
LinkDB
Position
23
AA seq 118 aa
MASKEGGDKAKGPQGAGDGKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLL
NLVLDNTTEFLRDPDDPYKLLEDTRALGLVVCRGTSVVLICPMDGMEAIPNPFITQEG
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcatcaaaagagggtggcgataaggcaaaaggtcctcaaggtgcaggggatggtaaa
gaaaagcgaagaaaagagtccattctcgatctcagtaaatacttggagaaaagcatacgc
gtgaaatttgccggtgggcgcgaagccgccggcatcttgaagggttatgatccgctgctt
aatctcgtgctcgacaacaccactgaatttcttagagatcctgatgacccatacaaacta
ctagaagacacaagagcattagggttagttgtctgtcgaggcacctcagtagttctgatc
tgtcccatggatggcatggaagctattccaaaccctttcatcacgcaggaaggctaa

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