Choristoneura fumiferana (eastern spruce budworm): 141441054
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Entry
141441054 CDS
T11020
Symbol
CSN4
Name
(RefSeq) COP9 signalosome subunit 4 isoform X1
KO
K12178
COP9 signalosome complex subunit 4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141441054 (CSN4)
Ubiquitin system [BR:
cfum04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
141441054 (CSN4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
CSN4_RPN5_eIF3a
PCI
RPN7
TPR_19
TPR_7
Ribonuc_red_lgN
Motif
Other DBs
NCBI-GeneID:
141441054
NCBI-ProteinID:
XP_073961779
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All DBs
Position
23:13345036..13359072
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AA seq
410 aa
AA seq
DB search
MSPIKIHQPLFLFVVVFYIEESGTGLKMWYRNVLMEILKNPDVDLPHSLKAFIEAIVNEN
VSLVISRQLLTDVSTHLALLSDAVSQDVSHFALDVIQPRVISFEEQVASIRQHLADIYER
NQNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAYVNRASLLQA
ETTNEQLQIYYKVCYARVLDYRRKFIEAAQRYNELSYRNIIHEDERMTCLRNALICTVLA
SAGQQRSRMLATLFKDERCQQLPAYSILEKMYLDRIIRRSELHEFEALMQTHQKATTQDG
SSILDRAVFEHNLLSASKLYNNITFEELGALLETPPARAERIAAHMISEARMHGHIDQIN
SIVHFETREILPQWDKQIQSLCYQVNSLIEKIAAAEPEWMAKIVEEEMIQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaataaaaatccatcagccactttttttgtttgtagtggttttttatattgaa
gaaagtggcacagggcttaaaatgtggtaccgcaatgttctcatggaaattcttaaaaat
ccagatgtggatctaccacactcactcaaggcatttattgaagcaattgtaaatgaaaac
gtgagcctggttatatccaggcaactgctcactgacgtcagcactcacttggccctgctg
tccgatgctgtgtctcaggatgtgtcccacttcgctcttgatgtcatccagccgagggtc
atttcatttgaagaacaggtagcaagtatcagacagcacttggcagacatttacgaacgc
aaccagaactggaaagaagctgccaatgtcttagttggaatacctttagaaacaggacaa
aaacaatactcggtggactacaagctagagacgtacctgaagatagcccggctgtacctg
gaggtcgacgaccccgtgcaggcggaggcctacgtgaaccgcgcctcgctgctgcaggcc
gagaccactaacgaacagctgcagatctactataaagtgtgctacgcccgcgtcttggat
tacaggaggaaattcatagaagcagcacagcgttacaatgagctctcgtaccggaacatc
atacacgaggacgaacggatgacgtgcctcaggaatgctctcatctgcacggtcctggcg
tccgccggtcaacagcggtcgcgcatgctggcaacactgttcaaggacgagcgctgccag
cagctgccggcgtactccatcctggagaagatgtacctggaccgcatcatccgccgctcc
gagctgcacgagtttgaggcgctcatgcagacgcaccagaaggcgacgacgcaggacgga
tcgtcgatcctggaccgcgcggtgttcgagcacaacctcctgtcagcgagcaagttgtac
aacaacatcacgttcgaggagctcggcgcgctgctggagacgccgcccgcgcgcgccgag
cgtatcgccgcgcacatgatcagcgaggcgcgcatgcacggacacatcgaccagatcaac
tccatcgtgcacttcgagactcgagagatccttcctcagtgggacaagcagatccagagc
ttgtgctaccaggtgaatagtctgatcgaaaagattgccgctgcggagccagagtggatg
gccaagatcgtcgaggaggaaatgatacagtaa
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