KEGG   Choristoneura fumiferana (eastern spruce budworm): 141441243
Entry
141441243         CDS       T11020                                 
Symbol
Prp5
Name
(RefSeq) pre-mRNA processing factor 5
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141441243 (Prp5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfum03041]
    141441243 (Prp5)
Enzymes [BR:cfum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     141441243 (Prp5)
Spliceosome [BR:cfum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    141441243 (Prp5)
 Complex B
    141441243 (Prp5)
SSDB
Motif
Pfam: DEAD Helicase_C KH_12 ResIII CdAMP_rec KH-I_KHDC4-BBP
Other DBs
NCBI-GeneID: 141441243
NCBI-ProteinID: XP_073962013
LinkDB
Position
23:12723234..12739591
AA seq 813 aa
MQKRRDRIERWRADRKRKELESAKKEVQKGSLVSNIQMPAKKWSLEDDSGDEAEEAEAKE
KAAAEEKKEAEDEIDPLDAYMQEVQQEVRKVNQMDQQRGLTVPTNGGTGIVILTGTAKKK
VSEQKNKGELIEQNQDGLEYSSEEENEDIKDTAANLASKQRKELAKVDHSSLEYMPFRKA
FYTEVSELARMSPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGVSKKEMDILKKLNFEK
PTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQSPLEDTDGPISLIMTPT
RELCMQIGKDIRKFAKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANS
GRVTNLRRVSYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFPRQMEALARRI
LQKPIEIQVGGRSVVCKDVEQHVAILEDDAKFFKLLELLGLYSQLGSIIVFVDKQENADS
LLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAARGLDVKQLVLVVNY
DCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDVLRAMELSGAVVPPTLRALWD
SYKDAQEKDGKKVHTGGGFSGKGFKFDESEAQAATEKKKYQKAALGLQDSDDEDVEGDLD
QQIETMLAAKKIVKEIKAKTVAEQLAAKLNTRLNYQPRDESANEPAEEVFRKYETELEIN
DFPQQARWRVTSKEALALISEYSEAGITVRGTYVPPGKNPPEGERKLYLAIESSQELAVA
KAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgcagaaacggcgtgatcgtatcgagcggtggagagccgaccggaaacggaaagaactc
gagtcagccaaaaaagaagtacagaagggcagtctcgttagcaacatacagatgcctgct
aagaagtggtcgctagaggatgactcaggcgatgaagctgaggaggcagaagctaaagaa
aaagcagctgcagaggaaaaaaaagaagcggaagacgaaattgatccattggatgcctat
atgcaagaggttcagcaagaagtgcgcaaagtgaatcaaatggaccagcaaaggggtcta
actgtgcccaccaatggtgggactggtatagttattttgacgggcacagccaagaagaag
gtctcagaacagaaaaataaaggtgaactgatagaacagaaccaggatggcctggagtat
tcttccgaagaagaaaacgaagacattaaagacacggcagcgaatctcgcgtcgaagcaa
aggaaagaactggctaaagtagaccactccagcttggaatacatgccgttccggaaagct
ttttacacagaggtgagtgagctagctcgaatgtccccagaagaagtggaagcgtatcgc
acagagttagaaggtatccgcgtgaaagggaaaggctgccccaagccgataaggacgtgg
gctcactgcggcgtcagcaagaaagagatggatatactgaagaagctcaactttgaaaag
cctacgcctatacaggctcaggcgataccggctatcatgtcgggaagggacctaataggc
atagcgaagaccggctctggcaaaaccctcgccttcatcttaccaatgttccggcacgtt
ctggaccagtctcccctcgaagacacggacggccccatctccctcattatgacacccacc
agggaactgtgcatgcagattgggaaagatataaggaagtttgccaagtccttggggctg
agggtcgtgtgtgtatacggtggcactggcatctctgaacagatagcggagctgaaacgt
ggcgctgagataatagtgtgcacgccgggtcgtatgatcgacatgttagcggctaattcc
ggtcgcgttacgaacctgcgtcgggtgtcgtacatcgtgcttgacgaggctgaccgcatg
tttgacatgggctttgagccacaggtaatgaagataatcgacaacatccgccctgaccga
cagaccgtgatgttcagcgcgacttttccacgccagatggaggcgctggctcgaaggata
cttcagaagcccatcgagatacaggtgggcggacgaagcgtagtctgcaaggacgtggaa
caacacgtagccatcttggaggatgacgccaagttcttcaagctgctggaactcctgggg
ctgtacagtcagttgggcagcatcatcgtgttcgtggacaagcaggaaaacgcggacagt
ctgctcaaagatttgatgaaggcttcatattcctgcatgagcttacatggagggattgat
caattcgacagggactccaccattgttgatttcaagaacggcaaagtgaagctcctggta
gcgactagtgtggcggcgcgcgggctggacgtcaaacaactggtgctggtagtcaactat
gactgccctaaccattatgaggactacgtgcatagatgcgggcgcaccggcagagcaggc
aacaaaggtttcgcctggacgttcctaaccccggaacaaggccggtacgcgggtgacgtg
ctacgtgctatggagctgagcggcgcagtcgtgccgcccaccctacgcgccttgtgggat
tcgtacaaggacgcgcaagaaaaggatggcaagaaggttcatacaggaggtggatttagc
ggaaagggtttcaagttcgacgaatcagaagcgcaagcggcgaccgagaagaagaagtac
cagaaggcagcgctcgggctccaagactctgacgacgaggacgtcgaaggcgacctcgac
cagcagatagaaaccatgctggctgctaagaagatcgtcaaagagatcaaggctaagacg
gtagcagagcagctggccgccaaattaaacacgcgtctcaattaccagccgcgcgacgaa
agtgccaacgagcccgctgaagaagtgtttaggaagtacgagacggaactggagatcaat
gacttcccgcagcaggcgcgctggcgagtcactagcaaggaggctctggccctgatcagc
gaatactccgaagcaggcatcacagtccgcggcacgtacgtccccccaggcaagaacccg
cccgaaggggaacggaagctgtacctggccatagaaagctcccaggaactcgccgtggcc
aaagccaagtcggagatcacgcgtctgatcaaggaagaattgctgaaactgcagacctct
gcccatcacatggtcaacaaggctagatataaggtcttgtag

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