Choristoneura fumiferana (eastern spruce budworm): 141441600
Help
Entry
141441600 CDS
T11020
Symbol
Fen1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141441600 (Fen1)
03410 Base excision repair
141441600 (Fen1)
03450 Non-homologous end-joining
141441600 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141441600 (Fen1)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141441600 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141441600 (Fen1)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
141441600 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
141441600 (Fen1)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
141441600 (Fen1)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141441600 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
DUF2718
Motif
Other DBs
NCBI-GeneID:
141441600
NCBI-ProteinID:
XP_073962486
LinkDB
All DBs
Position
24:complement(1321465..1327100)
Genome browser
AA seq
379 aa
AA seq
DB search
MGILGLSKLIADIAPQAVKEMEIKNYFGRKIAIDASMSLYQFLIAVRSEGAQLTSVDGET
TSHLMGTFYRTIRLVENGIKPVYVFDGKPPELKSHQLNKRAERREEAEKELQKATEAGDQ
ASIEKFNRRLVKVTKQHGEEARELLKLMGIPVVEAPCEAEAQCAALVKAGKVFATATEDM
DALTFGANVLLRHLTFSEARKMPVQEIHLDKVLDGLALKQNEFIDLCILLGCDYCGSIRG
IGPKRAIELIRQHRSLDEILKNIDTAKYPPPENWDFEQARRLFVEPDVKDAKDIEIKWTD
PDEEGLVKFLCGDKQFNEERVRNGAKKLMKARSTTTQGRLDGFFKVSTTPNPKRKAEEAK
KNSVNKKAKTGGGRGRKPK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcctaggcttatctaaacttatagctgacatagctccgcaggctgtaaaagaa
atggagatcaaaaattacttcggtcgaaaaatcgctattgatgcatctatgagcctgtat
cagtttttaattgcagtgagaagtgaaggggcgcagttgacatctgttgatggagaaaca
acatctcacttgatgggaactttctaccgtaccatcaggctggttgagaatggaatcaag
cccgtgtatgtgtttgatgggaaaccccctgaactaaagtcgcaccagctgaacaagcgg
gctgagaggagagaggaggccgaaaaagaactgcagaaggctaccgaagctggtgaccag
gcctcaatagagaaattcaaccgtcgccttgtaaaagtcaccaagcagcatggtgaggag
gcccgggagctgctcaaactgatgggcatccctgtagtggaggctccgtgcgaggctgag
gcgcagtgcgctgcattagtaaaggctggcaaagtgtttgcaacagcgactgaagacatg
gacgcgttgacgtttggtgctaatgtactgttgcgccatctcacgttctctgaggcgagg
aagatgcccgtgcaagagatacatctggacaaagtgctcgacggactggctctcaagcag
aacgagttcatagacctctgcatcctcctgggctgtgactactgcggctcgatccgcggc
atcggccccaagcgcgccatcgagctgatccgccagcaccgctccctcgacgaaatcctc
aagaacatcgacaccgctaagtacccgccaccagagaattgggacttcgagcaggcccgg
aggctgttcgtggagcctgatgtcaaagacgccaaggatattgagatcaaatggacagat
cccgatgaggaagggcttgtcaaattcctgtgtggagacaagcagttcaacgaggaaaga
gtccggaatggagccaagaaactcatgaaggccaggtctacaacaacacaaggcagactc
gatggattcttcaaggtatcaactactccaaaccctaaacgcaaggctgaagaagcgaag
aaaaactccgtcaacaagaaagcgaagactggcggcgggagggggaggaagcctaaataa
DBGET
integrated database retrieval system
