Choristoneura fumiferana (eastern spruce budworm): 141441694
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Entry
141441694 CDS
T11020
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141441694 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141441694 (Vps35)
Membrane trafficking [BR:
cfum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
141441694 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SOR
Motif
Other DBs
NCBI-GeneID:
141441694
NCBI-ProteinID:
XP_073962601
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All DBs
Position
24:complement(12414318..12429904)
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AA seq
875 aa
AA seq
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MLPTTNPFLYMSSNVQMTNQASPVEEQEKLLDEALNVVKVQAFQMKRCLDKSKLMDALKH
ASTMLGELRTSLLSPKSYYELYMAITDELRHLELYLLEEFRRGRKVADLYELVQYAGNIV
PRLYLLVTVGLVYINTNASLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDAL
TPETDDCGTVRDAIDFILMNFAEMNKLWVRMQHQGHSRDKERRERERSELRILVGTNLVR
LSQLECVSVQEYRRAVLPAILEQVVSCRDAIAQEYLAECCIQVFPDEFHLATLQPFLKSC
AELQPGVNIKNIIIALIERLAAYSQRNEGGVNFVVSEDGQEQEVQLFEVFSDQVAAITQS
RTDMPPEDTLSLQLALLRLAQRCHPDRLQYVDRVLAHTDTITRDILQHSGKTHLEQNTAV
FKELMKILKLPGEHYKDVLTLTKLAHYQPLIAHLPHGGRAALAAHLAGLLIDAGTVVTTA
EDVESVLSMMDVLVRDQPDQPDQPDPDDFAEEQWLLARLIHQFKSPSADQQYLILSACRK
ALQGGGAARIRHTFPPLLFHAYRLADQYRCEQDQDEMWEKKCQKIFQFCHQTISMLVKVE
LAELPLRLYLQGALAISEIGFANHETLAYEFIAQAFSLYEDEIPESRAQLQALTLVIATA
EQAKCLGAENMEPLRTSCALAAGKLLKKPDQARAVALCAHLYWKRDKDGNPWPLAEPTRA
LECLRKAARVAAQCMDGAVQAQLLAELLGRYALLRARRHPALQPPLIHAVSVGKRAAAAH
GRGRAGAAAGRAAGAVRAAAGAQAPRAAAAAHTRGDHQDPRGAGQRGGERGGRADRATLP
QHAAPSAPRRARPGAAGRRAAGLGGATVRHAHCWT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctacaaccaacccattcctgtatatgtcgtcgaatgtacaaatgacgaaccag
gcgtctcccgtcgaggagcaggagaagcttcttgatgaagctctcaacgttgtcaaagtc
caggcattccagatgaagcgatgtctagacaaatccaaactgatggatgctctgaagcac
gcatccacgatgctcggggaactgcggacctcactgctctctcctaagagctactatgag
ctttacatggcaataacggacgagctccgtcacctcgagctgtacctattagaggagttc
cgtcgcggacgcaaggtcgccgacctgtacgagctggtccagtacgccggcaacatcgtg
ccccggctttacctgctggtcaccgttgggctggtctatattaacaccaatgccagtctg
cggagggacttgcttaaggacctggtggagatgtgccgcggcgtgcagcacccgctgcgg
gggctgttcctgcgcaactacctgctgcagtgcacgcgcaacgtgctgcccgacgcgctc
acgccggagacagacgactgcggcacggttcgcgacgccatcgatttcatattgatgaac
ttcgcggagatgaacaagctgtgggtcaggatgcagcatcagggccattccagggacaag
gagcgccgcgagcgagagcgctcagagctacgcatcctggtcgggaccaacctggtgcgg
ctgtcgcagctggagtgcgtcagcgtgcaggagtaccggcgcgccgtgctgcccgccata
ctggaacaggtcgtctcctgccgggacgccatcgcgcaggagtacctggcggagtgctgc
atacaggtgttcccggacgagttccacctggcgacgctgcagccgttcctcaagtcgtgc
gcggagctgcagcccggcgtcaacatcaaaaacatcatcatcgcgctcatcgagcgtctc
gccgcctacagccagcgcaacgaaggcggcgtgaacttcgtggtgtccgaggacggacag
gagcaggaggtgcagctgtttgaggtgttctccgaccaggtcgccgccatcacgcagagc
cgcacggacatgccgccggaagacacgctcagcttgcagctggcgctcctccggctggcc
cagcgctgccaccccgaccggctgcagtacgtggaccgcgtgctggctcacaccgacacc
atcaccagagacatcctgcaacacagtggcaaaacccatttggaacagaacacggccgtg
ttcaaggagctgatgaagatcctcaagcttcccggggagcactataaggacgtgctgacc
ctcaccaagctggcgcattaccagccgctcatagcgcacctgccgcacggcgggcgggcc
gccctcgccgcgcatctggcaggcctgctgatagacgccggcaccgtcgtcaccacggca
gaggacgtggagtcggtgctgtcgatgatggacgtgctggtgcgcgaccagcccgaccag
cccgaccagcccgaccctgatgacttcgcggaggaacagtggctgctggccaggctgatc
caccagttcaagtcgccgtcggccgaccagcagtacctgatcctgagcgcgtgccgcaag
gcgctgcaggggggcggcgccgcccgcatcagacacaccttcccgccgctgctgttccac
gcctacaggctggccgaccagtaccggtgcgagcaggaccaggacgagatgtgggagaag
aaatgccagaagatattccagttctgccaccagactatcagtatgctcgtgaaggtcgag
ctcgctgagttgccgctgaggttatacctgcaaggcgccctggccatcagcgagatcggt
ttcgcgaaccacgagacgctcgcgtacgagttcatagcgcaggccttctcgctctacgag
gacgagatacccgagtcgcgcgcgcagctccaagcactcactctggtcatcgccaccgcc
gagcaggccaagtgtctcggcgcggagaacatggagcccctgcggacgtcgtgcgcgctg
gcggccggcaagctgctgaagaagcccgaccaggcgcgcgctgtcgcactctgcgcgcac
ctctactggaagcgcgacaaggacgggaacccgtggccgctggcggagccgacgcgcgcg
ctggagtgcctgcggaaggcggcgcgtgtggcggcccagtgcatggacggggccgtccag
gcgcagctgctggccgagctgctggggcggtacgcgctgctgcgggcgcgcaggcacccc
gcgctgcagccgccgctcatacacgcggtgagtgttggcaagcgcgcggccgcagcgcat
ggacggggccgtgcaggcgcagctgctggccgagctgctggggcggtacgcgctgctgcg
ggcgcgcaggcaccccgcgctgcagccgccgctcatacacgcggtgatcaccaagatccg
cgaggagctgggcaacgtggaggcgagcgaggaggccgagcagatcgcgcgacacttcca
caacacgctgcgccatctgcgccgcgccgcgcccgaccaggcgccgctggacgacgcgct
gctggcctagggggcgccaccgtccgccatgcccactgctggacgtag
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