Choristoneura fumiferana (eastern spruce budworm): 141441729
Help
Entry
141441729 CDS
T11020
Symbol
Syx16
Name
(RefSeq) syntaxin 16
KO
K08489
syntaxin 16
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
141441729 (Syx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141441729 (Syx16)
Membrane trafficking [BR:
cfum04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
141441729 (Syx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
TRP
Orf78
DUF5345
DUF2779
DUF2116
MCPsignal
Motif
Other DBs
NCBI-GeneID:
141441729
NCBI-ProteinID:
XP_073962662
LinkDB
All DBs
Position
24:complement(13624841..13634211)
Genome browser
AA seq
341 aa
AA seq
DB search
MVSRSLTEVFVLMRNNAIHSRQLFSEHNDSERVKLMRNNSHDMEAGLELRSESNAPPPWA
DALEEAHYIITRLRTKLSELQSRHSRQIRRPALDDSSEQQHIGRLTAEIGRHFTHAYTHL
TAIKAQVRHGNSTEQKLTTNVVLALVSTLQELSLTFRTAQSSYLKSLTSREERSNAYFDL
PNFEELSLDDKPTLLPDLTNNQTDLLFSLPSTSGTQTNNFMDDEQQDTFEKPSLNQKQML
LMQEENTKMVAEREEEVNKIVRSIVDLNEIFKDLGQMVHEQGTILDRIDYNIENTQVQVH
EGFKQLQKAERYQKRNRKMHCILILAVLVIVLVVLLIIIKS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgcgaagtcttactgaagtcttcgtgcttatgcgtaacaatgcaatacacagt
cggcagctgttttcggaacataatgattcagaacgggttaagctcatgcgaaataactcg
catgacatggaagcaggtctggagcttaggtcagagtccaatgctccgccaccttgggct
gacgcccttgaggaggcccattatattattactaggctaagaacaaagctgtcggagctc
cagtcccgccactcgcgccagatccggagacccgcgttggatgactcgagcgagcagcag
catataggccgtctcaccgcggagatcgggcggcacttcacgcatgcgtacacgcacctc
accgctatcaaggctcaagttagacatggcaattcaacagaacaaaagctaacaactaac
gttgtcttagcactagtgtccaccctgcaagaactgagtctcacctttcgaacggcgcag
tctagctatctaaaatctcttacatccagagaagagagatccaatgcctactttgatcta
cctaactttgaagaacttagtttagacgacaaacctaccctattaccagatctaacaaat
aatcaaacggacctactgttctctttaccaagcacatcgggtacacagactaacaatttt
atggatgacgaacaacaagatacctttgaaaagccatcgcttaatcagaaacaaatgctg
ttgatgcaagaagagaacaccaagatggtagcggagagagaggaagaagttaacaaaata
gtccgttctatagtggacctaaacgagatatttaaggacttgggacaaatggtccatgaa
caagggacaattttagatagaatcgattataatatcgaaaatacacaggtccaagtgcac
gaagggttcaaacagttgcagaaagccgaacggtaccagaaaaggaatagaaaaatgcac
tgtatattaatattagccgtcttggtcattgttttggttgttctattgatcatcattaag
agttag
DBGET
integrated database retrieval system
