Choristoneura fumiferana (eastern spruce budworm): 141441732
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Entry
141441732 CDS
T11020
Symbol
Vps28
Name
(RefSeq) vacuolar protein sorting 28
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141441732 (Vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141441732 (Vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141441732 (Vps28)
Membrane trafficking [BR:
cfum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
141441732 (Vps28)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141441732 (Vps28)
Exosomal proteins of other body fluids (saliva and urine)
141441732 (Vps28)
Exosomal proteins of colorectal cancer cells
141441732 (Vps28)
Exosomal proteins of bladder cancer cells
141441732 (Vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Zn_ribbon_PRDM4
Motif
Other DBs
NCBI-GeneID:
141441732
NCBI-ProteinID:
XP_073962665
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All DBs
Position
24:complement(13670165..13674045)
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AA seq
210 aa
AA seq
DB search
MQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYTAMCSR
LLVQYRVAFKQVQGDEFPTIESFVTKFRLDCPAALERIRENKPNLIKDDKGNTNKYIAEI
VSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRLMMLPEDFEGKLKVQEWLNTLSEMSA
SDELSESQVRQLVFDLETSYGAFNKFLHKD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaccagacctgaattatacgaagaagtgaagctgtatcgcaatgctagggag
cgagaaaagcatgataacatggctgaattgtatgcagttgtgagcacccttcaacattta
gagaaagcgtacatgagggattgcgtgcgtgctcaggaatatacggctatgtgcagtcgc
ctccttgtgcagtatcgtgtcgccttcaaacaagtgcagggtgatgagtttccaacgata
gagtcctttgtcaccaagttcagattagactgcccagccgctttagagaggataagagag
aacaagccaaatctaatcaaagatgataaaggaaacactaacaaatatattgctgaaatt
gtgtctctattcataacactgatggacaaactgcggctggaattccgcgctatggacatg
atccaaccggagctccgagacttgagggacaccatggaccgactgatgatgctgcctgaa
gacttcgagggaaaacttaaggttcaagagtggctgaacacactgtcagaaatgtcagca
tcagatgagctgtcggaatctcaagtgaggcagttggtgtttgatctggagacctcatac
ggagcttttaacaagttcctgcacaaggactga
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