KEGG   Choristoneura fumiferana (eastern spruce budworm): 141441856
Entry
141441856         CDS       T11020                                 
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030  DNA replication
cfum03410  Base excision repair
cfum03420  Nucleotide excision repair
cfum03430  Mismatch repair
Brite
Enzymes [BR:cfum01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     141441856 (DNAlig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     141441856 (DNAlig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     141441856 (DNAlig1)
DNA replication proteins [BR:cfum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    141441856 (DNAlig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     141441856 (DNAlig1)
DNA repair and recombination proteins [BR:cfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     141441856 (DNAlig1)
   NER (nucleotide excision repair)
    Other NER factors
     141441856 (DNAlig1)
   MMR (mismatch excision repair)
    Other MMR factors
     141441856 (DNAlig1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 141441856
NCBI-ProteinID: XP_073962847
LinkDB
Position
24:122224..140607
AA seq 943 aa
MNCLNKLLRPCKLIVFSVNKVVSVAASSRTSGDHISVFSFHFNVFQVRNMAQKSITSFFK
ITPKKSPEIKKETTENDNSFDDIETKPPSPVQNDTKRSSKRQRLDSDSSESQSPKKEPPP
SLTKKKVKRQRIESSESEVEPAKSPLTSAVKSEKETPVKSPVGSPRTSEQSLVESPVKTE
IKLEKSDSVKTYSSPKSKKAKKDLKTDNAGKKTAKKSSSTKSIKKEETKPKENDNAAKKT
AKKNSSTESIKKETPPKENGKESSKSYVEKKEVGVKKEDGGIVPETEYDPSKSKYHPIND
ACWRANQPVPYLALAKTLEAIEAISARLKIVEILSNYFRSVMVLTPEDLLPSVYLCLNQL
APAYHSLELGIAETYLMKAIGQCTGRTLAQMKAAAQKTGDLGAVAEQARSTQRTMFTPPP
LKTRAVFNALKDIASMTGQASVNKKIGKIQSLYVACRFSESRYLIRSLEGKLRIGLAEQS
VLQALAQAAAATPPGGGVLDATKGLSAAEFKAKVDEQALIIKTTYCECPNYELIIPVMLE
HGVAALPEHCKLTPGIPLKPMLAHPTKGVHEVLNRFEGTRFTCEYKYDGERAQIHVPKAD
GEGPDLPNASVFSRNQENNTSKYPDILQRLPSLLKSEVSSCVLDCEAVAYDIANKQILPF
QILSTRKRKDAAASEIKVQVCVFVFDVLYLNGRALVREPLEERRRLLRENFNEVEGSWQF
AVAKDCSSMEEVQQFLEDAVRGSCEGLMVKTLEGEHARYDIARRSHNWLKLKKDYLEGVG
DTIDVVVIGGYHGRGKRRGVYGGFLLACYDAAGDEYQALCKIGTGFSDEDLQTLTKTLEE
HVIETPRNYYRYDNAHAPDAWFAPACVWEVRCADLSLSPAHRAALGLIDPERGVSLRFPR
FIRVREDKTPEQATSAQQIAEMYLSQDQVKNQTSKPVNFDDFY
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgaattgtcttaataaactgcttagaccttgcaaattaattgtatttagtgtaaataaa
gtagtttccgttgccgcatcttcaagaacaagtggtgatcatataagtgtgttttctttt
cattttaatgtttttcaagtaagaaacatggctcagaaaagcattacatccttcttcaaa
atcactccaaagaaaagtccagaaataaaaaaggaaaccactgaaaatgacaattccttt
gatgatattgagacaaaaccaccatcacccgttcagaatgacacaaagagatcttcaaaa
agacagaggttagacagtgatagcagcgagtctcagtcaccaaagaaagagcctccacct
tccttaacaaaaaagaaagtaaaaaggcaacgaatagagagctcagagagtgaagtagaa
cctgcaaaatcaccattaacttcagcagtgaaatcagaaaaagaaacaccagtaaagtcg
ccagtcggttcaccaagaacatcagagcagtcattagtggagtctccggtaaagactgaa
attaaactggaaaagagtgacagtgtgaagacatatagttcacccaagagtaagaaagcg
aagaaggatttgaagacagataatgctggcaaaaaaactgctaagaagagttcaagcact
aaatccataaaaaaagaagagaccaagccaaaagagaatgataatgctgccaagaaaaca
gctaagaagaattctagcactgaatccatcaagaaagagactcctccaaaggagaacggt
aaagagtcaagcaagagttatgtagaaaaaaaagaagttggtgtaaagaaagaagatggt
ggaattgttccagaaacggaatacgacccctctaaatcgaaataccaccctatcaatgac
gcgtgctggagagccaaccagccggtgccgtatctggctctggctaagaccctggaagcc
atcgaagccatatcagcccgcctgaagattgtagagatactcagtaactacttcaggtcc
gtgatggtcctgaccccagaagacctgctgcccagtgtgtacctgtgcctgaaccaatta
gcgccagcttaccacagcttggagctcggcatagcagagacgtacctgatgaaggcgatc
gggcagtgcaccggccgtacgttagcgcaaatgaaggcggctgcgcagaagacaggcgat
ttaggcgcagtagcggagcaagcgcgctccacgcaacgcacgatgtttacgccgccgccg
ctcaagacaagggccgtgttcaacgcgctcaaagacatcgctagcatgacgggccaagca
tctgtgaacaagaaaatcggcaaaatacagtcactgtatgttgcctgtcgcttctccgaa
tctcgatatctaatacgttcactggaaggcaagctacgcattggacttgcagagcaatca
gtgctacaggcgctggcacaggctgcggccgccacgccgcccggcgggggcgtgctcgac
gctaccaaggggctctccgctgccgagttcaaggctaaagtagacgagcaagcgctcata
atcaaaaccacgtactgcgaatgccccaactacgagctgataatccctgtgatgctggag
cacggggtggcggccctcccggaacactgcaagctgacgcccgggatcccgctcaagccc
atgctggcgcatcccaccaagggggtccatgaggtccttaaccgtttcgaaggcactcgg
ttcacctgtgaatacaaatacgacggcgagcgcgctcagatccacgtgccgaaggccgac
ggcgagggccctgatctacccaatgcgtccgtgttcagcaggaaccaggagaataatact
agcaaatacccagacatcctgcagcggttaccgtctctactcaagagcgaagtgtcgagt
tgtgtgttagactgcgaagcggtcgcgtacgatattgccaacaagcaaatactgcctttc
cagatcctgtcgacgcgcaagcgcaaagacgccgccgcgtcggagatcaaagtgcaggtg
tgcgtgtttgtgttcgacgtgctgtacctgaacgggcgcgcgctggtgcgggagcccctg
gaggagcgccggcggctcttgagggagaacttcaacgaagtcgaaggctcatggcagttc
gcggtggccaaagactgcagctccatggaggaggtgcagcagtttttggaggacgccgtg
cgcggcagctgcgaggggctcatggtcaagacgttagagggagaacacgcgcggtacgac
atcgcgagacgcagccacaactggctgaagctaaaaaaagactacctagaaggcgtgggg
gacacaatagacgtggtggttatcggcgggtaccacgggcggggcaagcggcgcggcgtg
tacggcgggttcttactcgcctgctacgacgccgctggcgacgagtaccaagcgctctgt
aagatcgggaccggcttctccgatgaggatctgcagacgttgacgaagactctagaagag
catgttattgagacgccgaggaattattacagatacgacaacgcgcacgcgccggacgcg
tggttcgcgccggcgtgcgtgtgggaggtgcgctgcgcggacctgtcgctgtcgccggcg
caccgcgcggccctggggctcatcgaccccgagcgaggggtctcgctcaggttccccaga
tttatccgcgtccgcgaagacaagactccagagcaggcgacgtctgcgcagcagatcgcg
gagatgtatctgtcgcaagaccaggtcaagaaccaaaccagcaagcctgtcaacttcgac
gacttctactaa

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