Choristoneura fumiferana (eastern spruce budworm): 141442142
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Entry
141442142 CDS
T11020
Symbol
Tfb4
Name
(RefSeq) transcription factor B4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03022
Basal transcription factors
cfum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141442142 (Tfb4)
09124 Replication and repair
03420 Nucleotide excision repair
141442142 (Tfb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141442142 (Tfb4)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141442142 (Tfb4)
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
141442142 (Tfb4)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
141442142 (Tfb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
141442142
NCBI-ProteinID:
XP_073963149
LinkDB
All DBs
Position
25:6876494..6882724
Genome browser
AA seq
291 aa
AA seq
DB search
MADDNTPTDCSLLVVVVDTNPNQRYIIEDPKVLTNCLDAVIAFSNSHLMQKAKNQLAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEDKPGESLLAG
ALAMALCYISRVRRQLSPGLTMSSRILIVTGSSDTAAQYINYMNVFFTAQKQQVLIDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPEASERSKLVLPGGGRVDYRAAC
FCHREPLSIGYVCSLCLSVFCKFSPICTTCHTVFKIGGPLATKPKKKKMKI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgataatacaccaacagattgcagtctactagtggttgtagtagacacaaac
ccaaaccagcgctatatcattgaagacccgaaagtgctcacaaactgtctcgatgctgtc
atagcattctctaactcgcatctaatgcagaaggccaaaaatcagctagctgtaattggt
tgtcatttccataaaagtgaatacttgtatccttctcctggcaaaccactagatgtgaga
cagattgatggccaatatgaactcttcacacttgttgaaaagacaatcaagatgcgatta
gtgaaccttatcaaaagccagcctcaagaggacaagcctggggaatccttgttggcgggt
gccttggctatggccctctgctatatctccagggtgcgccgacagctgtctcccggcctg
acgatgagcagccggatcctcatcgtgactggcagctcagacactgccgcccagtacata
aactacatgaatgttttcttcacagcgcagaagcagcaagtgctaatagacgtatgttcc
ctggacaagcacctaagtttgctgcaacagggctgcgacatcaccggcgggctgtatctg
aaggtgccttcgcttgaaggtctcttgcagtacttgttgtgggtattcctcccggaagct
tcggagcggagtaaactggtgctgccggggggaggacgcgtggactaccgcgctgcatgt
ttctgccaccgcgagcctctcagcatcggctacgtgtgctcgctctgtctcagcgtattc
tgcaagttcagtcccatatgcacaacatgccatactgtgttcaagatcggcgggccactt
gcaaccaagcctaagaagaagaagatgaaaatctag
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integrated database retrieval system
