Choristoneura fumiferana (eastern spruce budworm): 141442172
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Entry
141442172 CDS
T11020
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04080
Neuroactive ligand-receptor interaction
cfum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141442172
04082 Neuroactive ligand signaling
141442172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfum04040
]
141442172
Ion channels [BR:
cfum04040
]
Ligand-gated channels
GABA-A
141442172
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
141442172
NCBI-ProteinID:
XP_073963180
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Position
2:complement(8161828..8189983)
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AA seq
484 aa
AA seq
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MRTRALLLAPALALVLPLVLAIARAQSERAAAAADRLENVTHTVSRILDGYDIRLRPNFG
GDPLYVGMDLTIASFDAISEVNMDYTITLYLNQYWKDERLGFGLQDEVLTLSGDFADKIW
VPDTFFANDKNSFLHDVTERNKLVRLGGDGSITYGMRFTATLACMMDLHYYPLDSQNCTV
EIESYGYTVSDVVMYWKETPVRGVEDAELPQFTILGHETNDRIEKLATGVYQRLSLSFKL
RRNIGYFVFQTYLPCILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR
ISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARARKRAKLKNRDLSTSTSVEKDLKC
SGGSRSPEEIIALRECSSASGRVSPLFGLRSKPLPAAAGAPPSLRLQREHTQLRYRTRPH
SRNSKNGSTGKPKMMHALRRGASVIKASMPKIRDVNVIDTYSRVIFPVCFLVFNAVYWVF
YIFD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgcgcgctctgctgctcgcgcccgcactcgccttggtgctgccgctcgtgctc
gcgatcgcaagagcacagagcgagcgcgcggcggccgcggccgaccgactcgagaacgtc
acgcacaccgtgtcacggatccttgacggatacgacatccgactaagacccaactttgga
ggcgatccgctgtacgtcggcatggatttaacaatcgcaagcttcgacgctatatctgaa
gtaaacatggactacaccataacactttatctgaatcagtattggaaagatgaaagatta
ggtttcgggctccaggatgaagtactcacgctatcgggggacttcgctgacaaaatttgg
gtgcctgacacgttttttgcaaacgacaagaatagtttccttcacgacgtgacggagcgc
aacaaattggtgcggctcggcggcgacggcagcatcacctatggcatgcggttcacagcc
acactcgcctgcatgatggacctccactactacccactggacagccagaactgcaccgtc
gagattgaaagctatggatacacggtgtcagacgtggtcatgtactggaaagagacgccg
gtacgcggcgtagaggacgccgaactgccgcagtttacgatactcggacatgagactaat
gatagaatagaaaagttagcgaccggcgtgtaccagcgactatcgctgagtttcaaactg
cggaggaacatcggctacttcgtgtttcaaacttacttgccgtgcattctcattgtgatg
ctctcgtgggtatcgttctggataaatcacgaagctacgtcggctcgagttgcgttaggt
ataacaacggtgctgactatgaccacaataagcacgggtgtgcgctccagcctcccgcgt
atctcttacgtgaaggccattgacatatatctggtcatgtgctttgtatttgtcttcgcg
gcgctcctcgagtacgccgcagtcaactacacgtattggggcgccagagcaaggaagcgg
gctaagttaaagaaccgggacctctccaccagcacgagtgtggagaaagatttgaaatgt
tcaggtggttcccgttctccggaagagatcatagcactgcgggagtgctcgagcgcgtca
ggccgagtgtcccccctgtttgggctccggtccaagccgctgccagccgccgccggcgca
ccgccctcattaaggctacagcgagaacacacgcagttgagatatcgcacaaggccacat
tctagaaattctaaaaatggatcgaccggcaagccaaaaatgatgcatgcacttcgtcgt
ggtgcatctgtcatcaaagcgtctatgcccaaaatcagggacgtcaacgtcattgacacc
tactctcgagttatctttcctgtctgcttcctcgtctttaacgccgtttactgggtcttc
tacatcttcgattaa
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