Choristoneura fumiferana (eastern spruce budworm): 141442206
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Entry
141442206 CDS
T11020
Symbol
SmD2
Name
(RefSeq) small ribonucleoprotein particle protein SmD2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141442206 (SmD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141442206 (SmD2)
03032 DNA replication proteins [BR:
cfum03032
]
141442206 (SmD2)
Spliceosome [BR:
cfum03041
]
Complex A
U1 snRNP components
Sm proteins
141442206 (SmD2)
U2 snRNP components
141442206 (SmD2)
Complex B
U1 snRNP components
141442206 (SmD2)
U4/U6.U5 tri-snRNP components
141442206 (SmD2)
Complex C
U2 snRNP components
141442206 (SmD2)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
141442206 (SmD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RYDR_ITPR
bPH_12
Motif
Other DBs
NCBI-GeneID:
141442206
NCBI-ProteinID:
XP_073963224
LinkDB
All DBs
Position
25
Genome browser
AA seq
119 aa
AA seq
DB search
MATTAKPRSEMTLEELSKIEEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPRTGKGKKGKAVNKDKFISKMFLRGDSVILVVRNPLATAAGK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacagccaagccacgctcggagatgactctcgaggaattatctaaaattgaa
gaggaagaattcagtactgggcccctttccgtgcttacacagtctgtaaagaacaacact
caagtattgatcaactgtcggaacaacaaaaagctgctgggacgtgtgaaggctttcgac
cggcactgtaacatggtgcttgaaaacgtaaaagaaatgtggactgaagtaccacggact
ggcaaagggaagaagggtaaagctgtgaacaaggacaagttcatttccaaaatgttcctc
cgtggagactctgtcatcctagttgtaagaaatcccctcgccactgctgcaggaaagtaa
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