Choristoneura fumiferana (eastern spruce budworm): 141442801
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Entry
141442801 CDS
T11020
Symbol
rdgC
Name
(RefSeq) retinal degeneration C isoform X1
KO
K13807
serine/threonine-protein phosphatase with EF-hands [EC:
3.1.3.16
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
141442801 (rdgC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141442801 (rdgC)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141442801 (rdgC)
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
PPEF/PP7 protein phosphatases
141442801 (rdgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF_EFCAB10_C
EH
IQ
ANIS5_cation-bd
SAPC2_N
LRR_9
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
141442801
NCBI-ProteinID:
XP_073964025
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All DBs
Position
2:10079773..10186423
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AA seq
707 aa
AA seq
DB search
MFSLAEGCGCVSFRGGRRNRSLGDDSSSCRSSEIEQEVPKKLGRRVLNGECTMKALVPFL
KFWKRDDVSMTKAERTMKAAILIQQWYRRYLARMEVRRRYTWTIFQSIEYAGEQDQVKLY
NFFNALLSHMRDSSGRLSSERTSRTASVLEQVFSEESDEGGGADETAPPKPTRGPDIEFP
LQRKDIDLLIEAFRKKKKRFEIYSTFQHRLHAKHVAHILKEATQVLKRLPNINVATTSIS
SQITVCGDLHGKLDDLLVIFHKNGLPSPENPYIFNGDFVDRGKKGLEVFLLLLACMLAFP
GGVYLNRGNHEDLIMNSRYGFIKEVHQKYRHNAERLLKLIEGVYRWLPLGTIINNRVFVV
HGGISDTTDLDMIRSLERDKYVSLLRPPVTENSQPGSEVIDKVEWKQVFDILWSDPQCIG
GCVANALRGAGTYFGPDVTSSFLQKNKLSFLVRSHECKPGGYEILHNGNVITIFSASNYY
ELGSNKGAYLKLCGNSLERQFVQYTAAVSRTRRLTFRQRVGLVETSAMRELHNHIMSARR
PLEATFRSMDLEQSGMISISDWCLAMEETTHLGLPWRMLKDKLVRTDAETRRVRYMDTFE
LIANRLARKADTQTVVETLYKNKSSLEAIFKILDKDNSGYITLEEFSEACQLLGKYMPNP
MTQEQLVDICRLMDINKDGLVDLNEFLESFRLAEKSLQDEDDEEAAT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttggccgagggatgcgggtgcgtcagtttccgagggggaagaaggaaccgg
tctttgggcgacgactcctcttcttgccgcagttccgagatagaacaggaggtgccaaag
aaactaggaaggagagtccttaatggggaatgcactatgaaagctcttgtgcccttcttg
aagttctggaagagagatgacgtcagcatgacaaaggctgaaagaacgatgaaagcggcc
attttgatccagcagtggtaccggcgttatctggcgcgaatggaagtgcggagacggtat
acgtggaccatatttcagagcatcgaatacgccggagaacaagaccaagtcaagctatac
aatttcttcaatgcgttgctaagccacatgagggatagcagtgggcggctttcgtcggag
cggacgtcgaggactgcttctgtattggagcaggtattctcggaagagtctgacgagggt
gggggtgcagacgaaacggcgccaccgaagccaacccgtggccccgacatcgagttcccg
ctgcagaggaaggatatcgacctactgattgaagcttttaggaaaaagaagaaacgattt
gaaatatactcgacattccagcatcgtctacacgcgaagcacgtggcgcatatcctcaag
gaagccacgcaagtgttgaaaagattgcctaacatcaacgtggccaccacttccatctcc
agccagataactgtctgcggcgacctgcacgggaaacttgacgacttgctcgtcatattt
cacaagaatggtctgccgtcgcctgagaacccatacatattcaacggggacttcgtggac
cgaggcaagaagggtttggaagtgtttctcctactgctggcttgtatgctggccttccct
ggaggggtttacctgaaccgcgggaatcatgaagatctaattatgaattcgaggtacggt
ttcataaaagaagttcatcaaaaatatcggcacaacgcagagcggctcctgaaactaatc
gaaggcgtgtaccgttggctacctcttggcaccatcatcaacaaccgagtgttcgtcgta
cacggcgggatctcggacaccaccgacctggacatgattcgtagcctcgaaagggataag
tacgtatcgctgctccggccgccagtgactgagaactcccaaccaggctctgaggtcata
gacaaagtggagtggaaacaggtgttcgatattctctggtcggacccgcaatgcataggc
ggttgcgtggcgaatgcccttcgaggcgctggcacgtatttcggacccgacgttacttca
tcctttctccagaaaaacaagctgagcttcctggttcgaagccacgagtgcaagcctggt
ggatacgaaatattacacaatggaaatgtcattacaatcttctctgcgtccaactattac
gagttggggtccaataaaggcgcgtacctgaaactctgcggtaattctctggagcggcag
tttgtgcagtacacggcggccgtgtcacgcacacgacggctcacgtttcggcagcgggtc
ggcttggtcgagacatcggccatgagggagctgcataaccacattatgtctgcacggaga
ccgctcgaagccacattccgcagcatggatctggaacaaagcggaatgatatccatcagc
gactggtgcctagcaatggaggagacgactcacctggggctaccatggaggatgctcaag
gacaaactcgtgcgcaccgacgccgagacgcgacgcgtccgttacatggatacctttgaa
ttaattgccaatagacttgcaaggaaagctgatacgcaaacggtggttgaaactctttac
aagaacaaatcaagtttagaagccattttcaaaattctagacaaggataactcgggttac
ataacgttagaggaattctcagaagcttgtcagctgctgggtaagtacatgccgaatccc
atgacacaggagcagctagtggacatctgtcggttgatggatattaataaggacggttta
gtggacctaaacgagttcctcgaaagctttcggctagcggaaaagagcctgcaagacgag
gatgacgaggaagcggccacctga
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