Choristoneura fumiferana (eastern spruce budworm): 141442828
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Entry
141442828 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141442828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141442828
04121 Ubiquitin system [BR:
cfum04121
]
141442828
03036 Chromosome and associated proteins [BR:
cfum03036
]
141442828
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141442828
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
141442828
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141442828
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141442828
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
141442828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
BRCT_2
zf-RING_5
BRCT
zf-RING_6
ANK_LRRK2
NCH2
Sina_RING
Motif
Other DBs
NCBI-GeneID:
141442828
NCBI-ProteinID:
XP_073964051
LinkDB
All DBs
Position
26:6276964..6278898
Genome browser
AA seq
551 aa
AA seq
DB search
MKNTKVAVAPVASFSCVKMSKSTKDLNSFLKALDAVNESLSCVECMEFCKNPVTLSKCFH
IICSEHFSGLNQCPKCEASLEDCTTWSDDKLSDAVDAAKNLSKMFEPLQEKNVHGSDVGS
VDTMIAGLRKSKRDSNTATRHSEKEENSDSKLKVTKPSQNKTLNTSLISAASNISKSSKT
FEKRNRKGETMLHIACRLGKLDKVTKMLHEGANVNTKDNAGWTPLHEVVQNGRLDLVKLL
LQHNALVNVPGQDNETPLHESLRFNHIDITKELVNHGADINARNCKGETPLELASAELKS
VLQNVADKRTVTEESFDLSFIERQMEEDNEEIRVFCTSQYRTVHNKLKTLSKHHINIHIE
LKFSNKVTHLIVDAEDGVCVSSLDVLQGIVNNLWIITSEWVTKSTEENLELFKEYEICGV
GATTYNGPKRARYNRYKQLPGIFDGCHFYLHNFNTKYKISDKIEVTKAILSKLISDAGGI
VLRRVPNPESIPDFEKLVPYHAQKGGKLVKCSHYIIYKDMYEPLYNMQHLKALPIGWLIE
CIEKYELCEPW
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacaaaggtagctgtagcgcctgtagctagcttttcttgtgtgaaaatgtcg
aagtcgacgaaagatttgaatagctttctaaaagccctagacgcggtgaacgagagtctt
tcttgtgtagaatgcatggaattttgtaagaatcctgttactctgagcaaatgctttcac
atcatttgttccgaacattttagtggtttgaatcagtgtcctaaatgtgaagcatcgcta
gaagactgcaccacctggtcagatgataaattaagtgatgcagttgacgctgcaaagaat
ttatctaagatgtttgagcccttgcaagaaaaaaatgttcatggttcagacgtcggttct
gtggatacgatgatcgcgggcctcagaaagagtaagcgagacagtaatacagcgacacgc
catagcgaaaaagaagaaaattctgattcaaagttaaaagttactaaaccatcacaaaat
aaaactttaaatacttctttaatatctgcggcttcaaacatatctaaaagcagcaaaaca
ttcgagaaacgaaacaggaaaggtgaaacaatgcttcatatagcatgtagattgggtaag
ttggataaagttactaaaatgttacatgaaggagctaatgtgaatacgaaggataatgca
ggctggacaccacttcacgaagtagtacagaatggacgtcttgatttagttaagcttctt
cttcagcacaatgctctagttaatgtaccaggtcaagataatgagacaccgttgcatgaa
tctttgagatttaaccatattgatataactaaagaactagtaaatcatggagctgatatt
aatgcaaggaattgcaaaggtgagactccacttgaacttgcatctgctgaattgaaatct
gtactacaaaatgtagctgacaaacgaacagttactgaagaaagttttgatttgtccttt
attgagaggcagatggaagaggacaatgaggaaataagagttttctgcacatctcagtat
cggactgttcataataaactgaaaactttgagcaaacaccacattaatattcacattgaa
ttaaaattcagtaacaaagtcacacatcttattgttgatgctgaggatggtgtatgtgtt
tcaagccttgatgttttgcagggcattgtaaataacctttggattataacttctgaatgg
gtcacaaaatccacagaagaaaacttggagctgtttaaagagtatgaaatctgtggagta
ggcgctactacctacaatggtccaaagcgcgcaagatacaacagatataagcaattgcct
ggtatatttgatggttgccacttctatttacacaatttcaacacgaaatacaagatttct
gataaaattgaagtcacaaaagccattttaagtaagcttatatctgatgctggcggaatt
gtcctccgtagagtaccaaatcccgagtctataccagattttgagaagttggtgccatac
catgctcagaaaggaggaaaactggtgaaatgctcgcactatatcatctataaagacatg
tatgagcccctatacaacatgcagcatttgaaagctcttccgattggatggctcattgaa
tgcattgagaaatatgaactgtgcgaaccttggtga
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