Choristoneura fumiferana (eastern spruce budworm): 141443086
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Entry
141443086 CDS
T11020
Symbol
BRWD3
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141443086 (BRWD3)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
141443086 (BRWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
HVO_A0563_N
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
141443086
NCBI-ProteinID:
XP_073964398
LinkDB
All DBs
Position
26:588290..631418
Genome browser
AA seq
2005 aa
AA seq
DB search
MEEPNEDPRVVPELYFLIAKFLSGGPLTETAKTLLKELERVEVLPRRLDWEGAEHAQSYN
ELAAQYRDLPWSRLAAVCERALRLSPALPAPASASASAAASALRVRHSLLGDSLVQERPK
YSFFKKDHTLARRLVSRELGGVTGAQGPAALLPPRMLAGLRLQRRTLGHLSAVYCLAVDC
AGRVVVTGADDLLVKVWSLRDGRLLCTLRGAGAEITDVCLTRDGALLAAGSVDRLVRVWS
LAGGEPRAQLHAHAGTITSVHWSGWARGDVRWLASTSTDGSVAFWACAAGGQFLSQPVQY
MERMRPGACHMICAAWSAGGAFLAAGSQDHHVRVYMVDSEGGPARVLETAVHSEAVDSLA
WAHRGLRFVSGSKDGAAAVWTLHAAAWRHELLHCHPLTDDPSAKDDGKKLKVTMVCWDLS
DAYVITAVSDCTIRVWCSRTCSLVRVLRGHRDEAYVLEAHPLLPGVLLSAGHDGQLFVWD
APTGEVLASFLNRIEGQGEGAIFDAKWGGAGQLAACDAHGHLLLLGLAAGAPLMARLPTE
LFFHTDYRPLLRDAQGQALDEQTEIPPHLMPPPFLVDVEGAPHPPEFQRLVPGRENLALS
QLVPAADAARNRIDIMIEALAAERTPGLVNGLGLGAGRGAACGAGRASATRRAAGSWRTC
RPAPARSCRPRRPPRAPPPTDRGEPQHYDAEMNAFELAWWRREMRRRPIMISTAPEPGRR
RARARAQAKARARAPPVPVPVRRAVEEPPAPAADSSPSDTSDESVRLSRSPSRSPSRSHS
RTSRSRSRSHSHSHSHSRSSRTTMDLSDSSSHSGSKSDNSSSSQYSDWENGAALAPPARA
RRRPVAARRYVQREREREREREIQSEHVCAEARGGGCGGGGRGAAGGELPELYRPGEWLT
AVSPRKAPYHPQMGDECLYFRLGHQRYLEAVAEKDLYPVTARDRPWETHQVYECELVKVV
GIKYAIKPPRVACVRLACSLPRARPGGTSGAGAGIVVVYHDMPDVIDFLVLRQQYNAACA
RGWASGDRFRCMIDDSWWTGVVLECSAGPGGAGGAGRAALGRGGRGALGGGAAARFLSLK
VRWDNGEVERLSPWDLEPPDPERNPSALGGAVPVLPHELEAVLYKAEPHEWPPRGDRAAA
CRAIAHHLNQVMSLSAAEPFVAPVDLQLYPTYALVVPYPIDLSTIRARCDHLFYRRAAAA
QFDARYLASNAERFNEPRAPIVRQARLVTDLLLYIISHWREVDVVAKYHELAAAYRSEED
EPAPRATAAGGRGRGGGRGAAGAWRAGVGRVLRELMASADAEPFREPVQLDQAPDYLSVV
RRPMDLGAVARRLAAGRYARADQARRDIAQVFRNSRAYNTNKRSRIYSMTVRLSALFAEL
WAAHVPAPRAPAPRPPRTRRRDPSESAAEAEAEAEAEAEWGRARSGSSSMSEPLAALAAA
RLRRARGPHSSDSDAPLRGHRKGKGVGKKSTRGNGLPPPSPQPGPAYPPELYQPANGLHS
SSGSSPERAARSPPAPGPAPGPAPHHPRAQRLNGLPLVSAGVLQCIVRLCVAAAPEEAAP
ALVGRERAPAAPRRPRHKHKRTRERFTAEWSLSSSSSSQSGCSGRSPELEAARRYESDRS
YRPRSNSDDEPLQRYRERQGSGARAEPGPSQPPPAPAPARHKRLRVRRPRVYNEDSDEDS
AAAISKRAPHHARRPPHGTRHEVRGGGAVQTRTAPPPSASARRTTRAARPTGRDMRYGGG
GTDEDSAAAISKRAPHHARRPPHGTRHEVRGGGRYRRGQRRRHQQARAAPRAPPAHGTRH
EVRGGGGGTDEDSAAAISKRAPHHARRPPTGRDMRYGGGGAVQTRTAPPPSASARRTTRA
ARPTGRDMRYGGGGGGTDEDSAAAISKRAPHHARRPPHGTRHEDSAAAISKRAPHHARRP
PHGTRHESAAPLQLAGHAGHGSGHAGHAGHAGHAGHAGHLHTDHDYVNGHGDARHHGSPP
PGGVSISSRGRVRKLTAKARGLLRD
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctaacgaggaccctagggtcgttcccgaactctactttctgatagcgaaa
tttctttcgggtggacccctgacggaaactgcaaagacgttgttaaaagaactcgagaga
gtagaggtcctgccgcggcgcctggactgggagggggccgagcacgcccagtcttacaat
gaattggcggcgcagtacagagacctgccgtggagccggctggcagccgtgtgcgagcgc
gcgctgcggctgtcgcccgcgctgcccgcccccgcctccgcctccgcttccgccgccgcc
tccgcgttgcgcgtgcgccactcgctgctcggagactcgctcgtacaggagcgacctaag
tactccttcttcaagaaggatcacacgctcgcgcgtcggctggtgtcccgcgagctgggc
ggcgtgaccggagcacaggggccggcggcgctgctgccgccgcggatgctggccgggctg
cggctgcagcgccgcacgctcggacacctctcggccgtctactgcctcgccgtggactgc
gcgggccgcgtcgtcgtcacgggcgcggacgacctgctggtgaaggtgtggagcctgcgg
gacgggcggctgctgtgcacgctgcggggcgccggcgcagagatcacggacgtctgcctc
acgagggacggcgcgctgctggccgccggctccgtcgaccggctggtgcgcgtctggagc
ctggccggcggggagccgcgcgcgcagctgcacgcgcacgccgggaccatcacatcggtg
cactggtcggggtgggcgcgcggcgacgtgcggtggctggcgtcgacgtcgacggacggg
tcggtcgcgttctgggcgtgcgcggccggcggccagttcctgtcgcagcccgtgcagtac
atggagcgcatgcggcccggcgcctgccacatgatctgcgccgcctggtccgccggcggg
gccttcctggccgccggctcgcaggaccaccacgtcagggtgtacatggtggacagcgag
ggcgggccggcgcgcgtgctggagacggcggtgcactcggaggccgtggacagcctggcg
tgggcgcaccgcgggctgcgcttcgtgtccggctccaaggacggcgccgccgccgtctgg
acgctgcacgcggccgcctggcgccacgagctgctgcactgccacccgctcacggatgat
ccatcagctaaagacgatggcaaaaaactcaaggtgacgatggtttgctgggacctgagc
gacgcatatgttatcacggcagtctcggactgcaccatcagggtgtggtgttcgcgaaca
tgctcgctggtgcgcgtgctgcgcggacaccgcgacgaggcgtacgtgctggaggcgcac
ccgctgctgcccggagtgctgctctccgcgggacacgacggacagctgttcgtgtgggac
gcgcccacgggggaggtgctggcgtcgttcctgaaccgcatcgaggggcagggcgagggc
gccatcttcgacgccaagtggggcggcgcggggcagctggcggcgtgcgacgcgcacggc
cacctgctgctgctggggctggcggccggcgcgccgctcatggcccgcctgcccacggag
ctcttcttccacacagactaccgcccgctgctgagggacgcccagggacaggcgctggac
gaacagacggagatccccccgcacctgatgccgccgccgttcctggtggacgtggagggc
gccccccacccgccggagttccagcggctagtcccgggccgggagaacctggcgctcagc
cagctcgtgcccgccgctgacgccgccaggaacaggatcgatattatgatcgaggcttta
gcggcggagcgcacgccggggctggtgaacggcctggggctgggggcggggcggggggcg
gcgtgtggcgcggggagggcgtccgccacacggcgggccgctggcagctggcgcacgtgc
cgccctgcacccgcccgctcgtgccgcccgcgccgcccgccgcgcgcgccgccgccgacc
gacaggggtgagcctcaacattacgacgcggagatgaacgcgttcgagctggcgtggtgg
cggcgcgagatgcggcggcgccccatcatgatcagcacggcgcccgagcccggccgccgc
cgcgcccgcgcccgcgcccaagccaaagcacgcgcccgcgccccgccggtgccggtgccg
gtgcggcgcgcggtggaggagccgccggcgcccgcggccgacagctcgcccagcgacacc
tcggacgagtccgtgcgcctgtcgcgctcgccctcgcgctcgccctcccgctcgcactcg
cgcaccagccgcagtcgctcccgctcgcactcgcactcgcactcgcactcgcgctccagc
cgcaccaccatggacctcagcgactccagttcacattccggcagcaagagtgataactcg
tcgtcgtcgcagtactcggactgggagaacggagccgcgctggcgccccccgcgcgcgcg
cgccgccgccccgtcgccgccaggaggtacgtacagagagagagagagagagagagagag
agagagatacagtccgagcacgtctgcgccgaagcgcgcggcggcgggtgcggggggggc
gggcggggggcggcggggggcgagctgcccgagctgtaccggccgggcgagtggctgacg
gccgtgtccccgcgcaaggcgccctaccacccgcagatgggggacgagtgcctctacttc
cggctgggccaccagcggtacttggaggcggtggcggagaaggacctgtacccggtcacg
gcgcgcgaccgcccctgggagacgcaccaggtctacgaatgcgagctggtgaaagtggtg
ggcataaagtacgcgatcaagccgccgcgcgtggcgtgcgtgcggctggcgtgctcgctg
ccgcgcgcgcggccgggggggacgagcggcgcgggcgcgggtatagtggtggtgtaccac
gacatgcccgacgtgatcgacttcctcgtgctgcgccagcagtacaacgcggcctgcgcg
cgcggctgggccagcggcgaccgtttccggtgcatgatcgacgactcgtggtggacgggc
gtggtgctggaatgcagcgcggggccggggggcgcggggggcgcggggcgcgccgccctc
ggacgcggagggcgcggcgcgctgggcggcggcgcggcggcgcgcttcctctcgctgaag
gtgcgctgggacaacggggaggtggagcgcctctcgccctgggacctcgagccgcccgac
cccgagaggaacccgtcggcgctgggcggcgcggtgccggtgttgccgcacgagctggag
gccgtgctgtacaaggccgagccgcacgagtggccgccgagaggggaccgcgccgccgcc
tgccgcgccatcgcgcaccacctcaaccaggtgatgtccctgtcggcggcggagccgttc
gtggcgccggtggacctgcagctgtaccccacgtacgcgctcgtggtgccctaccccata
gacctcagcaccatccgcgcgcgctgcgaccacctgttctaccggcgcgcggcggcggcg
cagttcgacgcgcgctacctggcgagcaacgccgagcgcttcaacgagccgcgcgcgccc
atcgtgcggcaggcgcgcctcgtgacagacctgctgctgtacatcatcagccactggcgc
gaagtggatgtagtggcgaagtaccacgagctagcggctgcctaccgctccgaggaggac
gagcccgcgccgcgcgccacggcggcgggggggcgggggcggggcggcggtcggggcgcg
gcgggcgcgtggcgcgccggcgtgggccgcgtgctgcgggagctgatggcgtcggccgac
gcggagcccttccgcgagccggtgcagctggaccaggcgcccgactacctgtcggtggtg
cgtcggccgatggacctgggcgcggtggcgcgccggctggcggcgggccgctacgcgcgc
gcggaccaggcgcgccgcgacatcgcgcaggtcttccgcaacagtcgcgcctacaacacc
aacaagcgcagtcggatctactcgatgacggtccggctgtcggcgctgttcgcggagctg
tgggccgcgcacgtgccggccccccgcgcccccgccccccggccgccccgcacccgccgc
agggacccctcagagagtgcggcggaggcggaggcggaggcggaggcggaggcggagtgg
gggcgcgcgcgctcgggctccagctcgatgtcggagccgctggcggcgctggctgcggcg
cggctgcggcgcgcgcgcggcccccactcctcggacagcgacgcgccgctcaggggacac
cgcaagggcaagggcgtcggcaagaagagcacgcgcggcaacggcctgccgcccccctcc
ccgcagcccggacccgcatacccccccgagctgtaccagccggcgaacgggctgcactcg
tcgtcgggctcgtcgccggagcgggcggcgcgctccccgcccgcccccggccccgccccc
ggccccgccccgcaccacccgcgcgcgcagcgactaaatggattgcctttagtaagtgcg
ggagtgctgcaatgtattgttcgtttgtgtgtcgcagcggcaccggaggaagcggcgccg
gcgctcgtcggacgagagcgtgcgcccgccgccccccgccgcccccgacacaagcacaag
aggacgcgcgagaggttcacggccgagtggtcactgtcgtcgtcgtcgtcgtcgcagtcg
gggtgctcggggcgctccccggagctggaggcggcgcgccgctacgagtcggaccgctcg
taccggccgcgctccaacagcgacgacgagccgctgcagcggtacagggagcggcaaggc
agcggcgcgcgcgccgagcccgggcccagccagccgccgcccgcgcccgcgcccgccagg
cacaagcggctgcgtgtgcgtcggcctcgcgtctacaacgaggacagcgacgaggacagc
gccgccgccatcagcaagcgcgcgccgcaccacgcgcgccgcccgccccacgggacgaga
catgaggtacggggggggggggcggtacagacgaggacagcgccgccgccatcagcaagc
gcgcgccgcaccacgcgcgccgcccgccccacgggacgagacatgaggtacggggggggc
ggtacagacgaggacagcgccgccgccatcagcaagcgcgcgccgcaccacgcgcgccgc
ccgccccacgggacgagacatgaggtacgggggggggggcggtacagacgaggacagcgc
cgccgccatcagcaagcgcgcgccgcaccacgcgcgccgcccgcccacgggacgagacat
gaggtacgggggggggggggcggtacagacgaggacagcgccgccgccatcagcaagcgc
gcgccgcaccacgcgcgccgcccgcccacgggacgagacatgaggtacgggggggggggg
gcggtacagacgaggacagcgccgccgccatcagcaagcgcgcgccgcaccacgcgcgcc
gcccgccccacgggacgagacatgaggtacggggggggggggggcggtacagacgaggac
agcgccgccgccatcagcaagcgcgcgccgcaccacgcgcgccgcccgccccacgggacg
agacatgaggacagcgccgccgccatcagcaagcgcgcgccgcaccacgcgcgccgcccg
ccccacgggacgagacatgagagcgcggcgccgctgcagctcgcggggcacgcggggcac
ggctccgggcacgccgggcacgccgggcacgcggggcacgcgggacacgccgggcacctg
cacacggatcacgactacgtcaacggacacggcgacgcgcgccatcacggctcgcccccg
ccgggcggcgtgtccatctcgtcgcgcgggcgcgtgcgcaagctgaccgccaaggcgcgc
ggcctgctcagggactga
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