Choristoneura fumiferana (eastern spruce budworm): 141443340
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Entry
141443340 CDS
T11020
Symbol
MED16
Name
(RefSeq) mediator complex subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
cfum
Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141443340 (MED16)
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
141443340 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_C
Med16_N
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_IFT122_1st
RLIG1
Beta-prop_HPS5
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
141443340
NCBI-ProteinID:
XP_073964680
LinkDB
All DBs
Position
27:complement(2215118..2235654)
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AA seq
794 aa
AA seq
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MELIYSMRRKPMKCEPPHFETSSDPEVVRPICTISACNIIAFSSPTELSDSDGATWGGHV
YVCDLDTPWDSHKVTSTTHPVSALEWDSEGKQLLVGTVEGEVSVFGMKDYLLNDWTCLYH
ASFPGEHVIKAVFFHNGRRVVVSDKKADAPAPAPAPAPATDRIQLLRPTPTLKGFGGIAC
EGACIITATGLIGALTPAPEPGRALSATECLRPARDRVPVASVAHKNGNLVVAAGGARCV
RCAVCSVARAPQHKPALHVQPLPTVYLDHTPVSLTWCLREDTDSLLIAGNTLSVWKLTER
AHPVHKLLAKGPLQGSTTPGGGQKPSSDCFNTVVWQQVSAAAVEGAVAHCAARRLHAAAP
LHILATSSPNRLLLARETHYICSTPVVVSGTPGAEPPAGGTPPKKPKYGETIPSGAPCAI
VSCVELSWLGGVAVAVDTHAQLHLYATQPDIPTPLSVQHTTALLEYSMVSGIDCRDIIMT
LKPGTVEAVYERLTETFQRQPPSFQQYYYHSWLKLRIALCRVIPSAQGCVSSLTMLLAAR
CAWAACAGALRERERDALGARLDGLLHDQPDTDKALVALEAKVELSSEAVALTPLRRVLQ
LCVDIAGTYLQHAAAHTNHPYESWTDSSALTLLRKLMVVVRAAGRGGEPLSRALQRLQHQ
PASKDVREECGALCLQLGSPRVWESLPRCTVSAPHGQPAPHYFEYGVEPEALRYAPEPPN
YGQCEVVPTQGMDSIRYMYLGGGRRAAKWRQCGRCGARALPAARPAKHPLQRAYDGRFLA
ACRCGGKWTLVSNY
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatttactccatgcgccgaaagcctatgaaatgcgagccgccacatttcgaa
acgtcatcagatcccgaagttgttcgacctatttgcaccatatcagcctgtaatatcata
gctttttcgtcacccacggagctttcagactctgacggagccacctggggtgggcacgtg
tatgtctgcgacttggacaccccttgggacagtcataaagttacaagcaccactcatcct
gtgtcggctttagaatgggacagcgagggcaagcagctgctggtggggacagtggagggg
gaggtctccgtctttggcatgaaggattacctgctcaatgattggacttgtttgtaccat
gcttcctttcctggggagcacgtaataaaggcggtgttcttccacaacgggcggcgcgtg
gtggtctccgacaagaaggcggacgcgcccgcgcccgcgcccgcccccgcgcccgccacc
gaccgcatccagctgctgcggcccactcccacgctcaagggcttcggcggcatagcgtgc
gaaggcgcctgcattataacagcgaccgggctgatcggagccctgacgccggcgccggag
cccgggcgcgccctcagcgccaccgagtgtctccgccccgcgcgggaccgcgtgccagtt
gctagcgtagcccacaagaatggtaatttagtggtggcagcgggcggcgcgcgctgcgtg
cgctgcgcggtgtgctcggtggcgcgcgcgccgcagcacaaacccgcgctgcacgtgcag
ccgctgcctactgtctacctcgaccacacgcccgtctcactgacttggtgtcttcgcgag
gacacggactctctcctcatcgctggcaacaccttgtcggtgtggaagttgacagagagg
gcgcatcccgtccacaaactgttggcgaaaggtccgttacaaggcagtacaacccccggc
gggggccagaagccgagttccgactgctttaacactgtagtgtggcagcaagtgtcagcc
gcggcggtggagggcgcggtcgcgcactgcgcggcgcgccgtctacacgcggccgcgccg
ctgcatatattggccaccagcagccccaaccggctgctgctggcaagggagacgcactac
atttgttctacccctgtggtggtgtcgggaaccccgggggcggagccccccgcggggggc
acgccccccaagaagcctaaatacggggaaactattccgtcgggcgcgccgtgcgcgatc
gtgtcgtgcgtggagctgtcgtggctggggggcgtggccgtcgccgtcgacacgcacgcg
cagctgcatctctacgccacgcagcccgacataccgacccccctgtcggtgcagcatacg
acagcgctgctggagtactcgatggtttccggcatcgactgccgggacatcatcatgacg
ctcaagcccggcaccgtggaggctgtctacgagagacttacggagacgttccaacgccag
cctccttcgttccaacagtattactaccacagctggctgaaactgaggatagcactctgc
agggtgataccgtcggcgcagggctgcgtgtcctcgctgacgatgctgctggcggcgcgc
tgcgcgtgggcagcctgcgcgggcgcgctgcgcgagagagagagggacgcgctgggcgcg
cggctggacgggctgctgcacgaccagcccgacacagacaaggctctagtagccctggag
gcaaaagtagaactgtcaagcgaggcggtagctttgacgccgctgcgccgcgtattgcag
ctctgcgttgacatcgccgggacctacttacagcacgctgcggcgcataccaatcacccg
tacgagtcgtggacggacagttccgcgctgacgctgctccgcaaactgatggtggtggtg
cgggccgcgggccgcggcggggagcccctgtcgcgcgcgctgcagcggctgcagcaccag
cccgccagcaaggacgtgcgagaggagtgcggcgcgctgtgcttgcagctgggctcgccg
cgcgtgtgggagtctctcccgcgctgcacggtctcggctccacacggccagcccgcgccg
cactattttgaatacggcgtagaacctgaagcgttacgatacgcaccggaacctcctaac
tacgggcaatgcgaggtcgtgccaacgcaaggcatggatagcatacgttacatgtacctg
ggcggcgggcggcgcgcggccaagtggcggcagtgcgggcgctgcggcgcgcgcgcgctg
ccggcggcgcggcccgccaagcacccgctgcagcgcgcctacgacggacggttcctggcc
gcctgcaggtgtggcgggaagtggacgttagtatcaaattattga
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