Choristoneura fumiferana (eastern spruce budworm): 141443372
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Entry
141443372 CDS
T11020
Symbol
chb
Name
(RefSeq) CLIP-associating protein
KO
K16578
CLIP-associating protein 1/2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141443372 (chb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cfum04812
]
141443372 (chb)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
141443372 (chb)
Cytoskeleton proteins [BR:
cfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
141443372 (chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Adaptin_N
HEAT_2
PDS5
TAN
KinB_sensor
Motif
Other DBs
NCBI-GeneID:
141443372
NCBI-ProteinID:
XP_073964712
LinkDB
All DBs
Position
27:complement(10138268..10219748)
Genome browser
AA seq
1462 aa
AA seq
DB search
MAHYPQPTSLEAALPLLLRPDLRLRQQLGDQLATLVRREPEITQDVAAELLEAMQAWLNG
GNFKVAQNGLETIAALSERLGTDFSHFVPGVLPHVIDRLADTKEAVRHMARVCIAALGES
KAAPPRALLARLTPATQHKAPHTREEAVRTIQTLLDTHGAQELQLRAAVPNLAGLLGDPS
SAVRDAAMQLMVDMYRHVGERLRSDLKKKELVPAQKLSLLEQKFDEAREAGLLLPTANQG
ADEADFVSRTTARRNMAIPTSARSRDGDYSGPPTPACEPPKRTVPGLYSLPSANRKPPPP
AKLNSATSVSSGVTCSGSNEAGSVSCEGFEAAFAATAPAAIYGARGLDDLCRHAATLLGD
KAAEWERRVDALKKIRSLLTANAHLNYPTEFAAHLKELSVPFLVVIKDLRSQVVREACIT
IAHMAKVLKNKLEQFSLYILQELINLIQNAAKVVSSAGTVCVRYIVTYVHCPRLVPVIAT
NLTTNKSKEIRSTLSEVLVLLLDKWSHQALEKQMCVVRDAIRRACVDADSTARTHGRRAY
WAYKRAFPGDAEQLFARLDAAAQKQLERERNVGSVDSLQHIGTERRAITSPRSPSVSVSD
RSPSSAGATARSVSAVDAAAAQRARARALYSHMTRAKMAAGTASLPRAKRSPVSTNSGVP
PSPERVVGRSRSRPGVSQSQPTSRSSSPSSRSSGPMSLASARRRPSGIPRSLAGSRETSP
TRTGRSSSVVGSAIRRRESVERTAPSRAPAATLRLLQQTRDAEGVLRSPEDSSAYDSGRR
DDDSEASSVCSERSLDSYRRHDSVSWSGSASRLGWEGSPPPPPPPDDIIALCASTHWTER
KDGLTHLANYLNSGRLLTDSQLRRLTELLNKMFVDAHTKVFSLLLDAVCELLLVHWQQLK
DWLYQLVFRLLMKLGTDILGSVQSKIMKTLDVIHECFPPELQLHNIFRFLADGATAPTAK
TKAAALRFLAELAHDYCTPNALQVALQGGATGVAGRALVKVAALAQEPRAADIRVSARRA
LACLYDCNPVPFTALMSELSPETQALVNGVLQQHVRRTSSTGSDSPLRASSATPGAADDV
YSRIRRTTTEIHTYTAQHANAECGNHMSSKDSGISQMSDVTLSNKGMNGGVPNGHYNAES
ARAASADSSEEANSTKESSPVPALHRLDLPPHGDYNSSLCRDKMKPYETDENGFLITKSG
LREQEVLEALCQLDTNSAPPEQWERLLLATHEILKYGDCRKPSEYFKNIVRVALATLAVD
ESTGDKENSENASNAQQSSGWATANERAAAEAVKVLIWLCRRPETRPQWLDYFDLILLKL
INAYGALSKEVMRAVDHGLPHVARALPAAQVLALLKPVIRTRGYPTSLCALKLAAEVAKA
RSDELTDDIVGQLMDGVSQLADHQNSAVRKAAIFCMVAFTFALGEERMQPHLKHLSVSKC
RLLQVYISKHRDEPGRGAPHAT
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggctcactacccccaaccaacttcgttggaggcggcgctgccgctgctgctgcggccg
gacttacggctgcggcaacagctcggcgaccagctggcgacgctggtgcgccgcgagccc
gagatcacgcaggatgtcgccgcggagctgctagaggccatgcaggcctggctaaatgga
ggcaacttcaaggtggcccagaacgggctggaaacgatagcggccctgtcggagcggctg
gggacagacttctcacacttcgtgcccggcgtgctgccccacgtcattgacaggctggcc
gataccaaggaagcagtccggcacatggcccgcgtctgcatcgccgcgctcggagagagc
aaggcggcgcccccccgcgcgctgctggcgcgcctcacccccgctacgcagcacaaggcg
ccgcacacgcgcgaggaggccgtgcggaccatacagacgctgctagacactcacggtgcc
caagagttacagctgcgagcagccgtccccaacctggccgggctgctgggtgatcccagc
agcgcagtaagagacgctgccatgcagctgatggtcgacatgtaccgacatgttggtgaa
agattaagatcggacctgaagaagaaagagctggttccggctcagaaactatctctgctt
gagcagaaattcgacgaggccagagaagctggcttattattacctacagccaatcagggc
gccgacgaagcggatttcgtatcgcgtactactgcgcgaagaaacatggccataccgacc
tccgcccgctcaagggacggagactactctggaccacccacgccagcttgcgaaccgcct
aaacgaactgtaccggggttgtatagtttgccatcggccaataggaagcctccgccgccc
gccaaactgaacagcgctactagtgtttcaagtggcgtcacgtgctccggctcgaacgag
gccggctctgtgtcctgcgagggcttcgaggcggcttttgctgcgaccgcccccgccgcc
atctacggggcgcggggcctcgacgacctgtgccggcacgccgccacgctgctgggggac
aaggccgccgagtgggagcggagggtcgacgctttgaagaagattcgttctctactgact
gcgaatgcacacctaaactatcccacggagttcgcggcgcacctcaaagagctgtcggtg
ccttttctagtcgtcatcaaggatctacggagtcaggtggtcagagaggcgtgcattacg
atagcacacatggcgaaggtgctaaagaataaactggaacagtttagcttgtatattctg
caagaactcatcaatctcatacagaatgctgccaaggtggtatcctcagcgggtacggtg
tgtgtgcgctacattgtaacatacgtgcactgcccgcgtctggtgcctgtcatcgcgacc
aatctcaccaccaacaagtccaaagagatacgctccacgctcagtgaagtgctagtactg
ctgttagacaagtggtcccatcaggcgttggagaagcagatgtgcgtcgtccgggacgcg
atccggcgcgcctgcgtcgacgcggacagcaccgcgcgcacgcacggcaggagggcgtac
tgggcgtacaaacgcgccttccccggcgacgcggagcagctgttcgctcgtctggacgcg
gctgcgcagaaacagctggagagagaacggaatgtcggcagcgtcgacagtttgcaacat
atcggcactgagaggcgagccatcacgagcccgcgtagtccgtctgtcagtgtgtcagac
cggtcgcctagctccgcgggcgcgacggcacgttccgtgtcggccgtggacgcggcggcg
gcacaacgcgcccgcgcacgcgctctctactcgcacatgacacgcgccaagatggccgcc
ggcaccgccagtctgcctcgagcgaagaggtccccagttagcaccaacagcggggtcccg
cccagtccggagcgcgtcgtcggccgctcgcgctcgcgccccggcgtttcgcagtcgcag
ccgacgtcgcgctcttcgtccccctcgtcgcggagcagtggccccatgtctctggccagc
gcgcgccggcggccctcggggataccccggtctctggctggctctagagagaccagccct
accaggacgggccgttcgagcagcgtggtggggtcggcgatccgccggcgggagtccgtc
gagcggaccgcgccctctcgagcgcccgccgccacgctcaggctgctgcagcagaccagg
gacgctgaaggagtgctgaggagtcccgaggacagttccgcgtacgacagcggccggcgc
gacgacgactccgaagcctccagcgtctgttcggagaggagcctggactcctacaggagg
cacgatagcgtgtcgtggtcgggctcggcgtcccgcctgggctgggagggctccccgccg
ccgccgccgccgcccgacgacatcatagcgctgtgcgccagcacgcactggaccgagcgg
aaggatggcctcactcacttggccaactacctaaactcggggcggctgctcacagactcc
cagctgcgccggttgaccgagctgttgaacaagatgttcgtggacgcgcacactaaggtg
ttctcgctgctgctggacgcggtctgcgagctgctgctggtgcactggcagcagctcaag
gattggctttaccagctggtgttcaggttactgatgaagctgggcactgacatcctcggc
tcagtgcagagcaagatcatgaagaccctggacgttatacacgagtgcttcccgccggaa
ctgcagctgcataacatattcaggttcctagcggacggggcgacggcgccgaccgccaag
acgaaggcggcggcgcttcgcttcctcgcggagctggcgcacgactactgcacgcccaac
gcgctacaggtcgcattacaaggcggcgcgacgggcgtggcggggcgcgcgctggtcaag
gtggctgcgctggcgcaggagccgcgcgccgccgacatcagggtgagcgcgcggcgggcg
ctcgcctgcctctacgactgcaaccctgtgcctttcacggcgctgatgagcgagctgtct
ccggagacgcaggcgctggttaacggagtactccaacagcacgtgcgaagaacatccagc
actggcagcgattcgccgctgcgggcgtcgtcggcgacgccgggcgccgcggacgacgtc
tattcgcggatacggcgcaccaccacagagatacacacgtacacggctcaacacgccaac
gcggaatgcgggaaccacatgtcgagcaaggactccggaattagccagatgtctgacgtc
actctgtccaacaagggtatgaacgggggcgtacccaacggacattataacgccgagagc
gcgcgcgccgcgtccgcggacagttccgaagaggccaacagcaccaaggagtcctcgccg
gtgcccgcgctgcaccgcctcgacttgccgccgcatggtgactacaactcatcgctgtgc
cgcgacaagatgaaaccttacgagactgacgaaaacggatttttgattactaaatccggt
ctccgcgagcaagaagtcttagaagcattatgtcagttggacacgaacagcgcgcccccc
gagcagtgggagcggctgttactggcgacccatgagatactcaagtatggagactgccgg
aagcccagcgagtacttcaaaaatatcgtacgagtggcgctcgcgacgctggcggtagac
gaaagtaccggcgacaaggagaactccgagaacgcttccaacgcccagcagtcttcaggc
tgggcgacggcgaacgagcgcgcggcggccgaggcggtcaaggtcctgatctggctgtgc
cgccgcccggagacgcgcccgcagtggctcgactacttcgacctgatcctgctcaaactt
atcaacgcgtacggcgctctcagcaaggaggtcatgcgagccgtcgaccatggactcccg
catgtcgccagagcgttgccggccgcgcaggtcctggccctcctgaagcccgtgatccgc
acgcgcgggtacccgacgtcgctgtgcgcgctcaagctggcggccgaggtcgccaaggcg
cgcagcgacgagctcaccgacgacatcgtcgggcagctcatggacggcgtctcgcagttg
gctgaccaccagaactctgcggtgcgtaaggcggccatattctgcatggtggcgttcacg
ttcgccctcggcgaggagcgcatgcagccgcatctcaagcatctgtctgtcagcaagtgc
cgcctgctgcaggtatacatcagcaagcaccgcgacgagcccgggcgcggcgcgccgcac
gccacgtag
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