Choristoneura fumiferana (eastern spruce budworm): 141443765
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Entry
141443765 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141443765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141443765
03036 Chromosome and associated proteins [BR:
cfum03036
]
141443765
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141443765
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141443765
PBAF complex
141443765
GBAF(ncBAF) complex
141443765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
141443765
NCBI-ProteinID:
XP_073965215
LinkDB
All DBs
Position
28:6669312..6722423
Genome browser
AA seq
842 aa
AA seq
DB search
MSFVADEDEEDATHIIYPRWTPGGGVRAPRVPARQPRAGALVLLPDSHDNVTQVEVRKSA
NWESSRAEPWRVAAPGRRPAAVQRVDERGDYEVDAAGKKKVHKLRLSVEELMPGGEPSGK
GKKSKRKRSPSPPPQKHGKRKSRITKRRDNDGDEEEDNASRDNTDAAPTPEAERATDRET
FTSVQSWRARSPGGGGAAAAPEPASAAPAAEAPATPAPVLDTHDDSQGKHSDSNTQETVV
KEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFM
IDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGLLEQWGLINYQLEPESRPTAMGPPPTS
HFHVLSDTPSGLQPLARQALPRPVENAAVPKMEAGLPNGADAGAPAAAVKAESTLEMGGA
PGLKLDQYRMGARGREWTDQETLLLLEGLELHATTGTAWRRTSARAPRRVHMHFLRLPIE
EPYLQTTSQKATKEKSRRRAAVFCVDHQLNTVIPKLLERLERHTIAMERAMLGVSLHNRI
RSGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIAAKATKAAMDEFAAIKRKEGSAE
CKNGAHGGGGREVKPKEEPPTRPQGPSTVDAKLQSAASAALAAAAVKAKHLAGVEERKIK
SLVALLVETQMKKLEIKLRHFEELEATMEREREDEDGLLRVGGRIDAAPEVALETKRPFI
LDGSHPTTRLLVRHYHVKAAHGQPESIVNDLKRNIGFKRKRTASAAKNKAARGAFAARAR
GARTRPPAPDPSAGAAKAPGLEVLCFAGPAPSCYPTTATAPAGFNAGPAQAPISEKANHT
FT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgttgctgacgaggacgaagaggacgcgacgcacataatctacccccggtgg
acccctggaggaggagtacgcgcgccccgtgttccggcgcggcaaccacgcgctggtgca
ctggtattactgcccgacagccacgacaacgtgacgcaagtggaggtgcggaagtcagcg
aattgggagagcagccgcgcagagccgtggcgcgtggccgcgcctgggcgtcgacctgcc
gcagtacaacgagtggatgaacgaggagattacgaggtcgacgccgctgggaagaagaag
gtgcacaagctgcgtttgtcggttgaagagctgatgccgggcggcgagccctccggcaaa
ggcaagaagagcaagcggaaacgctcgccctccccgccgccgcagaaacacggcaagagg
aagagccgcatcacgaagagacgagacaacgacggcgacgaagaagaagataacgcgtcg
cgagacaacaccgacgccgcgcccacgcccgaggccgaacgtgccaccgatagagagacc
tttactagtgttcagtcatggagggcacggagccccggcggcggcggggcggcggcagcg
cccgagccggcgagcgcggcgcccgcggccgaggcgcccgccacgcctgcgcccgtgcta
gacacgcacgacgactcgcagggcaagcatagcgactccaacacgcaggaaacggtagta
aaggaggagttggaggacaacgtcacggaccaaacccatcatatcgtcgtgccgtcctac
tcggcgtggttcgactataattccatacacaccatcgagaaacgcgccatgccagagttc
ttcaatggcaagaacaaatccaagacgccggagatttacctcgcttacaggaacttcatg
atcgacacgtaccgtctgaacccgacggagtacctgacgagcacggcgtcccgccgcaac
ctcgccggcgacgtctgcgccatcatgcgcgtgcacggcctgctggagcagtggggactc
atcaactaccagctggagccggagtcgcggccgactgcgatgggtcccccgccgacctcc
cacttccacgtgctgtccgacacgccgtccgggctgcagccgctcgcgcgccaagccttg
ccgcgtcccgtggagaacgcggcggtgcctaagatggaggcgggcctgccgaatggagcg
gacgcgggcgcaccggccgccgccgtcaaggctgagagtacactcgagatggggggagcg
cctggactcaagcttgatcagtaccgaatgggcgcgcgcgggcgcgagtggacggaccaa
gagacgctgctgttgctggaggggttggagttgcacgcgacgactggaaccgcgtggcgg
cgcacgtcggcacgcgcacccagacgagtgcatatgcacttcctgcgcctgcccatcgag
gagccctatctgcagacaacgtctcagaaggcgactaaggaaaaatctagaagacgggca
gcagtcttctgcgtagaccatcagcttaatactgtgatccccaagctcttggagaggctc
gagagacacacgatagctatggaaagagctatgcttggagtttctttgcacaatagaatc
cggagcggcgtactgggtccgctggcgtaccagccgatcccgttcagcaaggctggcaac
cctgtcatgagcaccgtggccttccttgcgtccgtcgtcgacccgcgcatcgccgccaaa
gccaccaaggctgccatggacgagttcgccgccatcaagagaaaagaaggcagtgccgaa
tgtaaaaacggagcccatggaggtggaggaagggaggtgaagccgaaggaggagccgccg
acgcgcccgcaaggtccgtcgacagtggacgctaagctgcagtcggcagcgtcggccgcg
ctcgccgccgccgccgtcaaggcgaaacatctcgccggcgtggaggagcgcaagatcaag
tccctcgtggcgctgctggtggaaacacagatgaagaagctcgagatcaaactgagacac
tttgaggagcttgaggccacaatggagagagaacgggaagatgaagatggcctcctgcgt
gtcggcggccgcattgatgctgctccagaagtcgccctggaaacgaaaagaccgttcatt
ctcgacgggtcacatccgacgacgaggctgctggtgcggcactaccacgtgaaggcagcg
cacggtcagcccgagtccatcgtcaacgacctgaaaagaaatattgggtttaagcgcaaa
cgcacggcgtctgcggcgaagaacaaggcggcccgcggtgccttcgcggcgcgcgcacgc
ggcgcccgcacgcgcccgcccgcgccagaccccagcgccggcgccgccaaggctcccggc
ctggaagtcctctgttttgccgggccggcaccgagttgttacccgacgacggcgacggcg
ccggcgggatttaacgccgggccggcgcaggcgccgataagtgaaaaagcgaaccataca
tttacataa
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