Choristoneura fumiferana (eastern spruce budworm): 141443776
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Entry
141443776 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141443776
Enzymes [BR:
cfum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
141443776
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141443776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
141443776
NCBI-ProteinID:
XP_073965227
LinkDB
All DBs
Position
28:complement(9132794..9150330)
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AA seq
667 aa
AA seq
DB search
MDEKAIFKICKDEGCCDACCLRYLGLKHPRTYENVKESVKKYMDEPTEGTVADNVSTESS
EPAKPEEQSNGTNGVAGDSVDQAAAEGAPAAKRSRGAPCRSCLGLLQEAAWDDACRAAKD
ELDKKRYEVSEFACALSAPLSALLREHYMVLTVRDTCPQYGAGQYHRRCTAQVSTTGAER
AAQGHYMVLTVRDTCPQYGAGQLPPALSALLREHYMVLTVRDTCPQYGAVRRRSVYPGAE
RAAQGTLYGAHCAGHLPAVRRRSVPPALSALLREHYMVLTVRDTCPQYGAGSVTSLKEAW
KWTFGVELAGRLGLRLASGARAALLVTLHYEHPGEGEDLELLKGLSPSARGRRPALDVTR
RGAEAALXRRPPAAAERAGGAGAAARVVAVTAARAPLYVAGRYMKLSRSLPQTPWLVRGR
RMMDSSVQEVIFKPLAELYELSPEQSEHRLKFVAAGREDVDVRCLGDGRPFAVEISDPRR
ELTAAELAAACRRIADSGSVRVLSMCHVTKEDLAELKKGEETKSKDYEALCIKLDHSEFD
EVSDPMAPVAVTAADIARINAFRNTPADDPAAAAVRLVQRTPIRVLHRRPLLARDKHILS
MRAEPVPGHPALLVLRLRAGAGAYVKEFVHGELGRTRPALGAALGAPADLLALDVTRVAL
PWPPPPR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaggcgatatttaagatatgcaaggacgagggttgctgcgacgcgtgctgc
ttgcgctatttggggctgaaacatccgcggacttacgagaatgtgaaggagtcggtaaaa
aaatatatggatgagcccactgaaggcactgtagctgataatgtatcaacagagtccagc
gagcccgcaaagccagaagagcagagcaatggtaccaatggagtcgctggagactcagtg
gaccaggcagcggcagagggcgcgccagccgcgaagcgcagccgcggggcgccgtgccgc
agctgcctcgggctgctgcaggaggccgcctgggacgacgcctgtcgcgccgccaaggac
gaactggacaagaagagatacgaggtgtcggagtttgcgtgcgcgctgtcggcgccgctg
agcgcgctgctcagggaacactatatggtgctcactgtgcgggacacctgcccgcagtac
ggcgcaggtcagtaccaccggcgctgtacggcgcaggtcagtaccaccggcgctgagcgc
gctgctcagggacactatatggtgctcactgtgcgggacacctgcccgcagtacggcgca
ggtcagttaccaccggcgctgagcgcgctgctcagggaacactatatggtgctcactgtg
cgggacacctgcccgcagtacggcgcagtacggcgcaggtcagtttaccccggcgctgag
cgcgctgctcagggaacactatatggtgctcactgtgcgggacacctgcccgcagtacgg
cgcaggtcagtaccaccggcgctgagcgcgctgctcagggaacactatatggtgctcact
gtgcgggacacctgcccgcagtacggcgcaggctccgtgacatccctgaaggaggcgtgg
aaatggacgttcggcgtggagctggccggccggctggggctccggctggcgtccggcgcg
cgcgcggcgctgctggtcacgctgcactacgagcacccgggggagggggaggatctggag
ctcctgaaggggctctctccgtcggcgcgcgggcggcggccggcgctggacgtgacgcgg
cgcggcgcggaggcggcgctgnngcgcaggcctcctgcagcagctgagcgcgctgggggc
gccggcgcggccgcgcgcgtcgtcgccgtgacggccgctcgcgcgccgctctatgtggcc
ggacggtatatgaagctgtcccgctcgctcccgcagacgccgtggctggtgcgagggcga
cgcatgatggactcctccgtgcaggaggtcatattcaagcccctcgcggaactgtacgag
ctgtctccggagcagagcgaacaccggctgaagtttgtggcggcgggacgggaggacgtg
gacgtgcgctgtctcggggacgggcggcccttcgccgtcgagatatccgacccgcggcgc
gagctgaccgcggcggagctggcggccgcgtgccgacggatcgcggacagcggcagcgtg
cgggtcctctccatgtgccacgtcaccaaggaggacctcgccgagctgaagaagggcgaa
gagaccaagagtaaggactacgaggcgctctgcatcaagctcgaccactcggaattcgat
gaggtgagcgatcctatggcgccggtggccgtgaccgcggccgacatcgcgcgcatcaac
gcgttccggaacacgccggccgacgaccccgccgccgccgccgtgcgcctcgtgcagagg
acgcccatacgcgtgctgcaccgccgcccgctgctcgccagggacaaacacatcctgtcc
atgcgcgccgagcccgtcccagggcacccggcgctgctggtgctgcggctgcgcgcgggc
gccggcgcgtacgtcaaagagttcgtgcacggggagctggggcgcacgcggcccgcgctg
ggcgccgccctcggagccccggccgacctgctggcgctggacgtgacgcgcgtggcgctg
ccctggccgcccccgccccgctag
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