Choristoneura fumiferana (eastern spruce budworm): 141443791
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Entry
141443791 CDS
T11020
Symbol
su(f)
Name
(RefSeq) cleavage stimulation factor subunit su(f)
KO
K14408
cleavage stimulation factor subunit 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141443791 (su(f))
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141443791 (su(f))
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141443791 (su(f))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-GeneID:
141443791
NCBI-ProteinID:
XP_073965256
LinkDB
All DBs
Position
28:complement(3475298..3516970)
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AA seq
731 aa
AA seq
DB search
MANPTPAVEETPEIDWGNERLTRAQRAVEANTYDVDSWSLLIREAQTRPINEVRSVYEKL
ITAFPTTGRYWKIYIEQEMKARMFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPT
YKEKMAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVDAVGSYAENQKISAVRKVYQRAVI
TPIIGIETLWKDYIAFEQSINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPAT
PPTVDREEMKQVELWKKYITWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQA
AQFLDHSAKLLTEKGDSNAARLFSDEAAAVYERATSGPLKRSTLLHFAHADYEESRLHYN
KVHQVYTRYLDMEDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDARSHYHVFVAAAL
MEYYCSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLK
PESSVDIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYP
CSIAELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDTSQMI
PYKPKANPLPGEHPIPGGTFPLPPAAAHLCTLMPPPTSFRGPFVAVDRLMALFNRISLPD
KPPVPTQENGCDTKLFDLARSVHWIVDDEGITTVANKSRRRKAGDDSDDDDLSMAPPVND
IYRQRQQKRVK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccgactcctgctgtcgaagaaactcctgaaattgattggggcaatgaacga
ttgacgagagcgcaaagagcggtcgaagccaacacttatgatgtagattcatggtccctt
ctcatcagagaagcacagacaaggcccatcaatgaagtgagatcggtctacgagaagctg
attacggcttttccaaccacaggccgatattggaagatctatatcgagcaagagatgaag
gcgcgaatgtttgagaaggtggaaaagctgttccagcgatgcctgatgaagattctcaac
attgagctctggcgtctatatctcaactatgtgaaagagacaaagtgtatgctgccaacg
tacaaagagaaaatggcccaggcgtacgacttcgccctggacaagatagggctggacatt
cacgcttacccgatatggaacgactacgtcacgttcctgaagagtgtagacgccgtcggc
tcgtacgcggagaaccagaagatttctgctgttaggaaggtctaccaaagagcagttatt
acccctattattggcatagagactttatggaaagactacattgcgtttgaacaaagcatc
aacactataatcgccgaacgcatggcaatggagcgttcccgggaatacatgaacgcgcgt
agagtggccaaagaactggagacggtcacccgaggactgaacagaaacatgcctgccacg
ccgccgactgtcgacagggaggagatgaaacaggtggaactatggaagaagtacataacc
tgggagcgttctaaccccttgcgctctgaagatacggccctggtggcccgccgcgtcatg
ttcgctatagaacagtgcctgctgtgtctggcgcaccatccagacgtttggcatcaggcg
gcacagttcttggaccactcggctaagctgctcactgagaaaggggattcgaacgcggcg
cgtctgttctccgacgaggcggcggcggtgtatgagcgcgccacgagcggccctctcaag
cggtccacgctgctgcacttcgcgcatgcggactatgaggagagccggctgcattacaac
aaggtgcaccaagtgtacacgaggtatttggacatggaggacattgaccccacgctggcg
tatgtccagtacatgaagttcgcgcgtcgcgctgagggcatcaagtcggctaggaccgtg
ttcaagcgagctagagaggacgcgaggtcacactaccacgtgttcgtcgctgcagctctc
atggaatattattgttccaaagacaagaacatagctttcagaatttttgagctgggactc
aagaagttctcgcatatacccgagtatgtgctgtgctatatagactatttgtcgcatctt
aacgaggacaacaacacccgcgtgctgttcgagcgcgtactttcatctggcagtctcaag
cccgaaagctccgtggacatctggaacaggttcctggagtttgagtccaatatcggggac
ctggtcagcattgtgaaggttgagaagcggcggcaggctgtgctggagaagatcaaagag
ttcgaaggcaaggagacggcgcaactcgttgacagatacaagtttctggatctctatccc
tgcagcatcgccgagttgaaatccatcgggtacaccgaggtggcgtctatgtcgaacaaa
tcttgggctctgggcggcccgctggccgggatatcgcctgagctggccgctgtcatccta
gggcagaaagacaacgatcccaacaaggacatagctcggccggacacgtcgcagatgatt
ccgtacaagcctaaggcgaacccgctgcccggcgaacatcctatacctggcggcacgttc
cccctcccccctgcggcggcccacctgtgcacgctgatgccgccccccacttccttccgc
ggccccttcgtcgccgtggaccggctcatggcactcttcaacagaatatctttgccagac
aagccgccggtgcctacccaagagaacggctgcgacacgaagttgtttgatctggcgcgc
tccgtgcactggatagtggatgacgaggggatcaccaccgtcgctaataagtctcgtcga
aggaaagctggcgacgattccgacgatgatgatttgagcatggctcctcccgttaacgac
atatatagacagcggcaacagaaacgcgtcaaataa
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