Choristoneura fumiferana (eastern spruce budworm): 141443993
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Entry
141443993 CDS
T11020
Name
(RefSeq) ribosomal RNA processing protein 1 homolog
KO
K14849
ribosomal RNA-processing protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141443993
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141443993
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141443993
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141443993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
141443993
NCBI-ProteinID:
XP_073965542
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All DBs
Position
28:210703..229324
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AA seq
666 aa
AA seq
DB search
MKATEKKRKIKKKPIDKSKKQQVAVVAQEIKFARLLSGNEKKTRDRVLRALKKWLLNCFE
KNYEFKEDDFTRVWKGLFYAVWMSDKPLVQEDLCESIAGILDLFPPEQIQSAMLLARAGF
KMLATEWFGIDQHRIDKFLMLVRRYLRGALRCVQRSGWSETACDHFAGMLAHKDGILALN
TPLFARNAISMSLHVADCYLEEISKVSMGRVPPASLCVLLRPLVLYVCHGAAPPLAAAAR
RVLTDLMAHGDVQEDDEEVKSDQEEGEESGDEAQGDEEQSDENDSDDEITDGPLDPRAGH
VDVVLQALPVPARQLADMLRAQLASAAGAGHRRARKCVALLEQFADGGHPLAAGGRPPPV
LEAGPPLRPARAARTLRALEKKLVANGDELALRGLSRKHRKRLLARSRAGHSIVDEVPAA
KRQTDKRTNANGDWQVEETEPDNKKKKRKQANKDNLEEPKIKKQKIETENNVKVKKDKAK
KAKAEEVGNVKVVKVNGAPNVKVKSDNTKDGKVKSDKTKDVKVKRKLREKNVEEKQSKVK
NSLKEKNEVKLKNDVKVKTQKDKSKQGKDGAKLVVNKIKKFQKQDKVNISLNGLNTPKKV
KFELKNNSMQGALDYYKSVRQSPNIPFDSSKRPSKTNLKVSTPSPINPFFKKKMTRRASF
AAQIVY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagagaaaaaacgcaaaatcaagaagaaaccgatagacaagtccaaaaaa
cagcaagtggccgtcgtagcgcaggaaattaagttcgccagattgttgtcggggaatgag
aagaaaacgcgcgatcgggtgctccgcgctttgaaaaagtggcttctcaattgttttgaa
aagaattacgaatttaaggaggatgatttcacaagggtttggaaagggctcttctatgct
gtgtggatgtctgacaaacctcttgttcaggaggacctgtgcgagagcatagccggcatc
ctggacctgttcccgcccgagcagatccagagcgcgatgctgctggcgcgcgccggcttc
aagatgctcgctacggagtggttcgggattgatcagcataggatcgacaagttccttatg
ttggtgcggcgttacctccgcggggcgctgcgctgcgtgcaacggagcggttggagcgag
acagcctgcgaccacttcgccggcatgctggcacacaaggacggcatcctagctctgaac
acaccgctcttcgctcgcaacgcgatctctatgtcgctgcacgtcgccgattgttacctg
gaggagatttccaaggtgtctatggggcgggtgccccccgcgagcctgtgcgtcctgctg
cgtccgttggtgctgtacgtgtgccacggcgccgcgccgccgctggccgccgccgcgcgc
cgggtgcttaccgacctcatggctcacggagacgtgcaggaagacgatgaggaggttaaa
tctgaccaggaggagggcgaagagagtggggatgaggcgcagggcgatgaagagcagagt
gatgaaaatgacagcgatgatgagatcactgatgggccgctggacccgcgggcgggccac
gtggacgtggtcctgcaagccctgccggtgccggcgcgccagctggcggacatgctgcgc
gcgcagctcgcgtccgccgccggcgccggccaccgccgcgccaggaagtgcgtcgcgctt
ctggagcagtttgctgacggcgggcacccgctggcggcgggggggaggccgccgccggtg
ctggaggcgggcccgccgctgcgtcccgcgcgcgcggcgaggaccctgcgcgctctggag
aagaagctggtcgccaacggggacgagctggcgctcagaggtctcagccgcaaacaccgc
aaacggctgttggccaggtcgcgcgccggacactccatcgtggacgaggtgcccgccgcc
aagagacagacagacaaacgtactaatgccaatggtgactggcaagtggaagaaactgag
cctgataacaagaaaaagaagcggaaacaagccaataaagacaacttagaggaaccaaaa
ataaagaaacaaaaaatagaaacagaaaacaatgtcaaagttaaaaaagacaaagctaag
aaagcaaaagccgaggaagttggaaatgttaaagtagtcaaagttaacggtgcacccaat
gttaaagtcaaaagtgataatacaaaagatggcaaagtcaaaagtgacaaaacaaaagat
gtcaaagtcaaaaggaaactgagagaaaaaaacgttgaagaaaaacaaagcaaagtaaaa
aacagtcttaaagaaaaaaacgaagtcaaacttaaaaacgatgttaaagttaaaacgcag
aaagataaaagtaaacaaggtaaagatggagcgaaacttgtggttaataaaatcaaaaag
ttccaaaaacaggacaaggttaatattagcctgaacggtttgaatacgccgaaaaaggtg
aagttcgagctgaaaaacaactcgatgcaaggagctctggattattacaagagcgtgcga
caaagtcctaacattccgtttgacagcagcaagcgaccatccaaaactaatttgaaagtg
tcaactccttcaccgattaatccattttttaagaagaaaatgacacgaagagctagtttt
gcggctcaaattgtatactaa
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