Choristoneura fumiferana (eastern spruce budworm): 141444149
Help
Entry
141444149 CDS
T11020
Name
(RefSeq) homeobox protein six1a-like
KO
K15614
homeobox protein SIX1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141444149
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
141444149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
141444149
NCBI-ProteinID:
XP_073965693
LinkDB
All DBs
Position
29:842420..880100
Genome browser
AA seq
250 aa
AA seq
DB search
MLGGPEWGQREATPPRDAPLPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPACERLH
AHESVLKAKAMVAFHRGNFKELYRLLESHTFSAHNHAKLQGLWLKAHYMEAERLRGRPLG
AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYIHNPYPSPREKRELAETTGLT
TVQVSNWFKNRRQRDRQAEHKDSGNPNEKQLDSSSDEDSDAAPAHALPGHAPQPLYPLYD
HPLHLHYRHT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggccccgagtgggggcagcgggaggccaccccccctagagatgctcccctg
ccgagttttggcttcacacaggagcaggtcgcctgcgtatgcgaggtcctgcaacaagct
ggcaatatcgagcgcctcggccgtttcctgtggtccctgccggcgtgcgagcgtctccac
gcgcacgagtcagtcctcaaagccaaggccatggtggcgttccaccgcggcaacttcaag
gagctctaccggctgttggagtcgcatacctttagcgcgcataaccacgccaagctgcaa
ggcctttggcttaaagcacactatatggaggccgagaggctgcgcgggcggccgctcggc
gcagtcggcaagtaccgcgtgcggcgcaagttcccactcccgcgcaccatttgggacggc
gaggagacctcttactgcttcaaggaaaaatcccggtcagttcttcgggactggtacatc
cacaacccgtacccctcaccgcgggagaagcgggaactcgccgagaccaccggcctcacc
actgtacaggtttcaaattggttcaaaaacaggcgacaacgtgataggcaagccgaacat
aaagatagcggcaaccccaacgagaagcagctagactcttcatcagacgaggacagcgac
gcggcgcccgcgcacgccctgcccggccacgcgccgcagccgctctacccgctctacgac
caccctctacatctacactaccggcacacgtga
DBGET
integrated database retrieval system
