Choristoneura fumiferana (eastern spruce budworm): 141444799
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Entry
141444799 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141444799
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141444799
Factors involved in mRNA localization
Other mRNA localization factors
141444799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
Motif
Other DBs
NCBI-GeneID:
141444799
NCBI-ProteinID:
XP_073966555
LinkDB
All DBs
Position
30:complement(525956..542969)
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AA seq
715 aa
AA seq
DB search
MVRTQLEALISDKSGGRRTLRKDLDAATLNQIETFHRQSFYWNCLLNLSDSLQKCCDLSQ
LWYREFYLEMTMGRKVNKCTVRHQHNEECNDLITMEKRIQFPIEMSMPWILTDHILRSKE
PAMMEYVLYPLDLYNDSAQYALTVFKKQFLYDEVEAEVNLCFDQFVYKLAEQVYAHYKQL
AASMLLDKRYRLSAWRASPGRXPHAGRYASLLRQRHVALLGRHVALSALVAQRINSDMHR
ALDAAVAKFEAGDITGVVELEGLIAVNRLCHKLLSRYLALDDFDSILRESDHGVLAPYGR
ITLHVFWELNYDLLPNYCYNAATDRFVKCRGIQFAANVQRERPQQYGHALLWGSKQLSLA
YSAQYAQYAGFVGTQHLHALVRLLGYQGAAVVVAELLGVARGLLHGTLAQFTRALQAAMP
RHCKLPRYDYGSNGVLGYYHAQLTDIVQYPDARTELFHAFRELGNIILFCMLIEQALSQE
EVTDLLHAAPFQNILPRPFTGEGEKPETKQKRLEAKYAALQIVQNVDKYGTAKQSQLARE
GDLLTRERLCCGLSLFSVVLRRLRGCLQAPQWPLPPAPPHHAPLHADDTNEFHRLWSALQ
FLYCIPVGDTQFTVEELFGEGLHWAGCTIVALLGQQRRFEALDFCYHILRVQRVDGKDEL
VKGIPLKRMVDRIRRFQVLNSQIFGVLARPLAADDERAGVEHVRCFPPPSAPNHP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggacacagctggaagctctgatctcggacaagtccggggggcggcgcactctc
cgcaaagacctggacgctgccacgctcaaccagatcgagacgttccaccgtcagagcttc
tactggaactgtctgctgaatctatcagattctctgcagaagtgctgcgatctctcccaa
ctgtggtaccgagagttctatctggaaatgaccatgggcaggaaagtcaacaaatgcaca
gtccgccaccaacataacgaggagtgcaacgacctgataaccatggagaaacgcatccag
ttccccatagagatgtccatgccgtggatactgaccgatcacatactgcgcagcaaggag
cccgccatgatggaatacgtcctctaccctctggatttatacaacgactctgcccagtac
gcgctcacggtgttcaagaaacagttcctgtacgacgaagtggaagccgaggttaacctg
tgcttcgatcagttcgtgtacaagctggctgagcaggtgtatgctcattacaagcagctg
gctgccagcatgctgttggacaagcgttaccggctgagtgcatggcgcgcgagccccggc
cggnngccgcacgccggccgctacgcgtcgctgctgcggcagcggcacgtcgcgctgctg
ggacggcacgtcgccctcagcgcgctggtggcgcagcgcatcaactccgatatgcaccga
gctttggacgcggcggtggccaagtttgaagctggagacatcactggggttgtggaactg
gaaggcctgatagccgtcaaccgtctctgtcacaaactcctgagccgctatttggctctg
gacgacttcgacagcatcctgcgggagtcagaccacggcgtgctggctccatacggacgc
atcactctgcacgtgttctgggagctcaactacgacctgcttcctaattactgctacaac
gctgccactgacagattcgtgaaatgccgcggcatccagttcgcggcgaatgtgcagcgc
gaacgcccgcaacagtacgggcacgcgctgctctggggctccaaacagctcagcttggct
tactctgctcagtacgcgcagtatgcaggtttcgtgggcacgcagcacttgcacgcgcta
gtgcgtctgctgggctaccagggggccgcggtggtggtcgcggagctgctgggggtcgcg
cgggggctgctccacgggactctggcgcagttcacgcgcgcgctgcaggccgccatgccg
cggcactgcaagctgccgcggtacgactacggctctaatggtgtgttgggctattaccac
gcgcaactgacagacatagtgcagtacccagacgcgaggacggagctgttccacgccttc
cgggagctcgggaacatcatactgttctgtatgctgatagagcaggcgttgagccaggaa
gaagtgacggacttactgcacgccgcgcccttccagaacatcttgccgcgcccgttcact
ggtgagggagaaaaaccggagacgaaacagaagcgattggaggcgaaatacgcggcactg
cagattgtccagaacgtcgacaaatatggcaccgctaagcaaagccagctggcccgcgaa
ggcgacctcctgacgcgcgagcgcctgtgctgcggcctgtcgctgttctctgtggtgctg
cggcggctgcgcggctgcctgcaggccccccagtggcccctgccccccgcgcccccccac
cacgcgcccctacacgcagacgacaccaacgagttccaccgattgtggtctgcgctgcaa
ttcctgtactgtatcccagttggtgacacgcagttcactgtcgaggagctgttcggcgag
ggcctgcactgggccgggtgcaccatagtcgcgctgttggggcagcagcgacggttcgag
gcgctggacttctgctaccatatactgcgggtgcaacgcgtggacgggaaagacgagctg
gtcaaagggatccctctgaagcgtatggtggaccgcatccggcgtttccaagtgctgaac
tcgcagatcttcggcgtgctggcgcgccccctcgccgccgacgacgagcgcgccggcgtc
gagcacgtgcgctgcttcccccctcccagtgcgcccaaccacccctag
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