Choristoneura fumiferana (eastern spruce budworm): 141445280
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Entry
141445280 CDS
T11020
Symbol
Ranbp21
Name
(RefSeq) exportin-5-like protein Ranbp21
KO
K14289
exportin-5
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141445280 (Ranbp21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141445280 (Ranbp21)
03036 Chromosome and associated proteins [BR:
cfum03036
]
141445280 (Ranbp21)
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
141445280 (Ranbp21)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
141445280 (Ranbp21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
DarP
Motif
Other DBs
NCBI-GeneID:
141445280
NCBI-ProteinID:
XP_073967177
LinkDB
All DBs
Position
2:complement(17439634..17458886)
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AA seq
1193 aa
AA seq
DB search
MGEVGGEVALIADELSRAVELTLNAAVAHEARNQAYNACESFKESSPWCAQAGLLLASGQ
YSAVVKHFGLQLMEHTVKYRWTQITQAEKIFIKENAMKLLYIGGWETGHLNDALARVIVE
MIKREWPQQWPTLLAELSDACAQGHVHTQIVLHVFLRLVEDVATLQTLEQHQRRKDIYQA
LTSNMSEIFAFFMRLIELHVQEFREKTAAGDNAAAASNGRVVQVVLLTLTGFVEWVSTNH
VVMNNGRLLQILCVLLQDAAFQLPAAECLLQVVNRKGSTKERKPLMILFSEDAISCIHRA
AVASISAVDENNYLFLKKLSQVVAGLGQQLTTLWNFATNVDFWMPVLLETMLLLTSHPSL
TLAHTTSGVWLAMFRHDHISKLPQVVAIIPRWLQAAAPKVLKVTYPASRASGVHDAATYA
CIDYDSEQEFAVFFSRCRTEILDCFRHCMTAAPLVTWAYVEQWTRSALDKVDTCPVQLDV
THPLHVEWEALSQVLDVVLSRLLQAEPRPSVVEGLQLLQRCVGCAPAAPLLLSLLLSLIS
ALFVFLSCAYSQLAGPSVGGAGAELLPRVLDKIFAALVYCGTGADARRSRAVKNVRRHAA
SLLVKLGSKYPLLLLPVFGRLHELCQAALARPGLSAVESVTIQEALLLVSNHFCCYERQS
ALVAQVLGDCSARWAALGPHVSSAAALARLVGLDAPPGEPGDPAEEERGNARRTLLHALT
LLLGVVKRTTVPADPDKASRGGFSAGLTPSGNPIWRNPCGAHVLPLFPHALSLARALHEL
HLPAAQGLIHAAHARALTPPPAERRNLLGLCESDAPPPQPQDRMQTFLHTLHDNVCHLVG
AAATTLGRELYSAPGLARALAGSLLHALPALPEHWLRPVVRHALKPLLLHCPPAHYQDVA
LPLLDVHAPFMLVHLSQRWDYIVSLYESGKLEEEGSNESQEVLEDMLVRHLTREHLEVLK
VSLVEGGVSAEAHAGIGDMEEDSPPPVSTQRAPEHVSELGALVLARPHAGPAVLHTVLRA
LTWQDSTSSLRATALALPALRAALEAGLVGEAEASGALAAVLQALRAHGQHDANQCALLA
LAVQAYETLRPRFPHVAAVLRAIPDVDAHDLRRLDEKLTPTAAKQNKIDKTKRDLFKKIT
ARLIGRNVGQLFKKEVYILDLPTMPAPARDKPRSALDAPDGAGLPGLFAPAPT
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagtcgggggagaggtggctctaatcgcagatgagctcagccgagctgtggag
ctcacactcaatgctgcggttgctcacgaggctcgtaatcaggcctataatgcttgcgaa
agctttaaagagagctcaccatggtgtgcgcaagccggcctgctgctcgcgagcgggcag
tattcagctgtggtcaaacactttggtctacagctcatggagcacactgtcaagtaccgg
tggacacaaatcacgcaagcggagaagatttttatcaaggaaaatgccatgaaactcctc
tacatcggtggctgggagacggggcacctgaacgacgcgctggctcgcgtcatcgtggag
atgatcaagcgcgagtggccgcagcagtggcccacgctgctggctgagctgagcgacgcg
tgcgcccaaggacacgtgcacacgcagattgtgctgcacgtgttcctgaggctcgtcgag
gatgtggccaccttacagacactagagcagcaccaacgccgcaaagacatctaccaggcg
ctgacgagcaacatgtcagaaatattcgccttctttatgcggctcatagaacttcacgtg
caggagttcagagaaaaaaccgctgctggggacaatgccgccgccgctagcaacggcagg
gtcgtacaggtggtcctgctaaccctgacggggttcgtggaatgggtgtcgacgaaccac
gtggtgatgaacaacgggcggctgctacagatactgtgcgtgctgctgcaggacgccgcc
ttccagctgcccgccgcagagtgtctgctgcaggtcgtcaacaggaagggctcgaccaag
gaacgaaagccgctgatgatcctgttcagtgaagacgctatatcttgtatccaccgcgca
gctgtcgccagcatcagcgctgtcgacgaaaacaactacctcttcctcaagaagctctct
caggtggtagccggcctaggccagcaattgactaccctgtggaacttcgccaccaacgtc
gacttctggatgccggtgcttctagagaccatgttgctgctgacgtcacacccttctctg
acactggcgcataccacgagcggggtttggctggcgatgttccgtcacgaccacatatcg
aagctgcctcaggtggtcgctattatacctaggtggctgcaggcagctgccccgaaggtg
ctcaaggttacatatccagcgtcgcgagcgagcggcgtgcacgacgcggcgacatacgcg
tgtatcgactacgacagcgaacaagagttcgcggtgtttttcagtcgctgccgtaccgaa
attctagactgcttcaggcactgtatgactgcggcgccgcttgtgacctgggcgtacgtg
gaacaatggacacgctccgctttggacaaggtggacacgtgcccagttcagttggacgtc
acgcatccgttgcacgtcgagtgggaagctctctctcaagtcctagacgtggtgctgtcg
cggctgctgcaagcggagccgcggcccagcgtggtggagggtctgcagctgctgcagcgc
tgcgtgggctgcgcgccggccgcgccgctgctgctgtcgctgctgctgtcgctcatctcg
gcgctgttcgtgttcctgagctgcgcgtacagccagctggccggtccgagtgtgggcggc
gcgggcgcggagctgctgccgcgcgtgctggacaagatcttcgcggcgctggtgtactgc
ggcacgggcgccgacgcgcgccgcagccgcgccgtcaagaacgtgcgccgccacgccgcc
agcttgctcgtcaagctcggctccaagtacccgctgctgctgctgccggtgttcgggcgg
ctgcacgagctgtgccaggcggcgctggcgcggcccgggctcagcgccgtcgagagcgtc
accatacaggaggcgctgctgcttgtctccaaccacttctgctgctacgagcggcagagc
gcgctcgtcgcacaggttttgggcgactgcagcgcacgctgggccgcgctcgggccgcac
gtgtcgtcggcggcggcgctggcgcggctggtggggctggacgcgccgcccggcgagccc
ggcgaccccgccgaggaggagcgcggcaacgcgcgccgcacgctgctgcacgcgctcacg
ctgctgctcggcgtcgtcaagcggaccaccgtgcccgccgaccccgacaaagcgtcccgc
ggcggcttcagcgcgggcctgacgccgtccggcaacccgatctggcgcaacccgtgcggc
gcgcacgtgctgccgctgttcccgcacgcgctgtcgctggcgcgcgcgctgcacgagctg
catctaccagcggcgcaggggttgatccacgcggcgcacgcgagggcgctgaccccgccg
cccgccgagcggaggaacctgctcggcctgtgcgagagcgacgcgccgccgccgcagccg
caggatcgcatgcagaccttcttgcacacgttgcatgataatgtgtgtcacctggtgggc
gcggcggcgacgacgttggggcgcgagctgtactcggcgccggggctggcgcgcgcgctg
gccggctcgctgctgcacgcgctgcccgcgctgcctgagcactggctgcggcccgtcgtg
cgccacgcgctcaagccgctgctgctgcactgcccgcccgcgcactaccaggacgtggcg
ctgccgctgctggacgtgcacgcgcccttcatgctagtacatctatcgcagcgatgggac
tacatagtgtcgctttatgaatccgggaagctggaggaagagggcagtaatgaatcacaa
gaagttttagaagatatgctcgtccgacatctcactagggaacacttagaagtgctcaag
gtttccctggtggaaggcggcgtgagcgcagaggcgcacgcgggcatcggcgacatggaa
gaggactcgccgccgcccgtcagcacgcagcgcgcgcccgagcacgtgtccgagctgggc
gcgctcgtgctggcgcggccgcacgccgggcccgccgtgctgcacacggtgctgcgcgcg
ttgacgtggcaggactcgacgtcgtcgctgcgcgcgacggcgctggcgctgccggcgctg
cgggcggcgctggaggcggggctggtgggcgaggccgaggctagcggcgcgctcgccgcc
gtgctgcaggcgctgcgcgcgcacggccagcacgacgccaaccagtgcgcgctgctggca
ctcgccgtgcaggcgtacgagacgctccgtccgcgcttcccgcacgtggcggcggtgctg
cgcgccatccccgacgtggacgcgcacgacctgcgccgcctcgacgagaagctgacgccg
accgccgccaagcagaacaagatcgacaagaccaagcgggacctcttcaagaagatcacc
gcgaggttaatcggtcgcaacgtgggtcagctgttcaagaaggaagtatacatcctggac
ctgccgacgatgccggcgccggcgcgcgacaagccgcgcagcgcgctcgacgcgcccgac
ggcgccggcctgcccggactgttcgcacccgcgcccacgtag
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