Choristoneura fumiferana (eastern spruce budworm): 141445298
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Entry
141445298 CDS
T11020
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04150
mTOR signaling pathway
cfum04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141445298
04150 mTOR signaling pathway
141445298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141445298
Membrane trafficking [BR:
cfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
141445298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
141445298
NCBI-ProteinID:
XP_073967199
LinkDB
All DBs
Position
2:complement(17800152..17818048)
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AA seq
979 aa
AA seq
DB search
MDGSNRVELHNSDILHIFGLTLLGEHLYWSDIHRRTLDRIDVATGQNRQAVVEQMGNVMG
IKAFRMNEPMGWNPCVDNNGGCSHFCFNRPRDYVCSCPLGLELESDKKTCIEPEAFLIYS
RKNVIGRISIEFDNNDAILPIKDLKEVSALAVHVSGSKIYWSDSKTKTINRCSINGAHME
KILEGMGLVEGLTIDWSGQNIYWTDTTTQRIEVARLDGSSRRTLIWQGLKKPKSIALDPK
KGYMYWSELGSKTIKRAAMDGSSPSTLIDQVGKVHAIAIDYDKRTIYWAALEPPTIEFAF
INGTGRKILADNISMPYALALYGDRVFWGDWNTGLIEAASKLDGSHRKSIHSQLDFLSDL
KIYHRARAAAGNQCGVDNGGCSHLCLPLPSETRADYRCACPTHYKLNRDNLTCSEPEEFL
LFAQKNSIGRIMVVNGECNDAFIPVTGLKNIKAIEYDPENKMLYWMDEDSHAIRRVPISY
STTSAITDSSAVITGLSRPFHMVLDVLGRALYWTCLDTDSINATSIDNNSSVGVILRGEN
MMPRHLAFHQTKRILIWNDVGLGAIMRSDVDGRGRIELARVANATALALDQAGGTVYWAA
NKQIHAVDLDGTNKRIIWQGGWAGSLSAYGGALYLSGGERALMRVPLHRRDAPAAPVPHL
ARVPQTLAVLKVARNHPCYGGRACGGAAAACGAGGACGCGLACRGCAPDRFLCHHTATAT
ATADPHCIPNEWKCDGQADCADGSDEASCGCAGGGAGLRCADGACAAALGECAAGAYCSP
ADPPMPDAFRCDERLCLGARLLCDGRQHCEDGSDEAPAACGYPRPDPDPDPEVGTTRSSN
AFVVCGGIAVSLGGCLAAWAALRRWRRRARQLPPAAQPLKPLQPRHPPLGASGSATVSSD
SLCRYPRPTANPPPSPATASGASAPARRRAYRHYRAMNRPPPPTPASTDADADAGESEPE
PAARAPPPSPDPAMYNHLH
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggacggctctaacagagtagagttgcacaacagtgacattctacacatatttggcctt
actttacttggggaacatctatattggagtgacatacataggcgaacgctggaccgaatt
gacgtagcaactggtcagaacagacaagcagtagtagaacaaatgggcaacgtgatgggc
ataaaggcgttccgaatgaatgagccaatgggatggaacccttgtgtcgacaacaatggc
ggctgctcgcatttctgcttcaaccgcccacgcgactacgtttgcagttgtccgctaggt
cttgagcttgaaagtgataagaaaacgtgcattgaacccgaagcatttttaatttacagc
cgtaaaaatgtgatagggcgcataagtattgaatttgacaataatgacgccattttaccc
atcaaagatttaaaggaagtcagtgcgttagctgtccacgtctccggctcaaagatctat
tggtccgacagtaaaactaagaccatcaatcgttgttcaataaacggtgcgcatatggaa
aagattctggaagggatgggcttagtagaaggtttaacgatagactggtcagggcagaac
atctactggactgacaccacaacgcagcgcatagaagtcgccagactcgacggttctagt
cgccggacgcttatatggcagggtttaaagaaacctaaaagcattgccttggatcctaag
aaaggctatatgtactggtcagaactcggttccaagaccatcaaacgcgcagccatggac
ggttcgtcgccctcaactctcatagaccaagtgggcaaagtccacgctatagccatagac
tacgataaaagaaccatttattgggccgcgcttgaaccaccgaccatagagttcgcgttc
atcaatggcacaggaaggaagatattggcggataatatatcgatgccttatgcgttggcg
ctgtatggggatagggtgttttggggcgattggaatactggcttaatcgaagcagcctca
aaattagacggcagccaccgcaaatccatccacagccaactggactttctgtctgatctg
aaaatctatcaccgcgcgcgcgccgccgccggcaaccagtgcggcgtcgacaatggcggt
tgctcccatctctgtctgcccctaccatccgagacgagagcggactatagatgcgcttgc
cccacgcattataaactgaacagagacaatctaacatgctcagaacctgaagaatttctg
ctgttcgcacaaaaaaactccatcggtcgcataatggtagtaaacggcgaatgtaatgat
gctttcataccagtcacaggcctcaagaatataaaagctatcgaatatgaccctgaaaac
aagatgctgtactggatggacgaagactcccacgcaatccgccgtgtacctatctcctac
tccaccacctcggccatcaccgactcttctgcagtcatcaccggtctttctagacccttc
cacatggttctagacgttctgggcagagctttgtattggacgtgtctggacacagattcg
attaacgccacgtccattgataacaactcgtccgtcggtgtcatattgcgcggagaaaac
atgatgcccaggcatttggcgtttcatcagactaaaagaattctaatctggaacgacgtg
ggcctgggcgcgataatgcgttccgacgtggacgggcgcggacgcatcgagttggcgcgc
gtcgccaacgccaccgcgctcgcgcttgaccaagccggcggcaccgtctactgggccgcc
aacaagcagatacacgccgtcgacctagacggcaccaacaaacgcataatctggcaaggc
ggttgggcgggcagcctgtcggcgtacggtggcgcgctgtacctgagcggcggcgagcgc
gcgctgatgcgagtgccgctgcaccgccgggacgcgcccgccgcgcccgtgccgcacctg
gcgcgcgtgccgcagacgctcgccgtgctcaaggtggcacgcaaccacccgtgctacggg
ggccgcgcgtgcggcggcgcggcggcggcgtgcggcgcgggcggcgcgtgcggctgcggg
ctggcgtgccgcggctgcgcgcccgaccgcttcctctgccaccacaccgccaccgccacc
gccaccgccgacccgcactgcatacccaacgagtggaaatgcgacgggcaagcggactgc
gcggacgggtcggacgaggcgtcgtgcggctgcgcgggcggcggcgcggggctgcgctgc
gcggacggcgcatgcgcggccgcgctcggcgagtgcgccgccggcgcctactgctcgccc
gccgacccgcccatgccagacgccttcagatgcgacgagcgactgtgcctgggcgcgcgg
ctgctgtgcgacggacggcagcactgcgaggacggctccgacgaggcgcccgccgcctgc
gggtacccgcgccccgaccccgaccccgaccccgaggtcggcaccacgcggtcgtcgaac
gcgttcgtagtttgcggcggcatcgcggtgtcgctgggcggctgcctggcggcgtgggcg
gcgctgcggcggtggaggcggcgcgcccgccagctgccgcccgccgcgcagccgctcaag
ccgctgcagccgcgacacccgccgctcggcgccagcggcagcgccaccgtgtcatcggac
agcctgtgccgctacccgcggccgacggccaacccgccgccgtcgccggccacggcgtcg
ggcgccagcgcgccggcgcggcgccgcgcgtaccgccactaccgcgccatgaaccggccg
ccgccgcccacgcccgcgtccaccgacgccgacgccgacgccggcgagtccgagcccgag
cccgccgcccgcgcgcccccgccctcgcccgaccccgctatgtacaatcacctgcattaa
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