Choristoneura fumiferana (eastern spruce budworm): 141445566
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Entry
141445566 CDS
T11020
Name
(RefSeq) RNA-binding protein RO60
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
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Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
TROVE
DUF6423
RGS_DHEX
Motif
Other DBs
NCBI-GeneID:
141445566
NCBI-ProteinID:
XP_073967505
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Position
Z:8652669..8670157
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AA seq
637 aa
AA seq
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MTEPTAILDPKHRIQLMRFLHTGNEVPKYFPGCWAAHKYFEVDSLQTLDFALANSVNNVE
VVEIILKAYKDGWYTRFETIAFALTKCLLVGSSEVKAATYKAVGQICNTPEQMMLFCKYT
RLLKTGNGRGWCKIVSNWYTSKDPMELAKDVSRVKARHGRSHNTLLRKSHVKIPPNDKSR
DAIVKYAIYGLKKAKQLVGEHEESKAVFDYIQKVEDLRHCEDPVAAAAMVAQHQFTLEHV
PGHLLISQDVWDSVLPHLDLHELLYNVQRVHNMGFLTSESPTTAILISLLTNNELVKKSK
VTPIEVFITLNNYKMKCRPMKHEKAKVAVEKERRRRTRQIFDSKTGLWEWSVTRRHPKEV
KHWGIDQPPNQAVINALTNLIDMTWVLTPKTGARYMITMDLRAHMFRGRHFCKNFVIPKK
GRKTSLTKTTPTAAGGGDAESEKKSKKHVLAECFYNKHVTPGHAAIIMALQILKREDTVK
LAVFTDDGVQIMNVDKKSANIEKAEVILRKGNLGRVQLDAPIEWAAKKKNKFDVFINMVD
RTTRYMELDQDQRGGRGPGGRFGPPPPAAAELVDHCPVRALIRYRANIAANAKLVVMSLA
SHRVATTNGSHEGVLDIIGIDEHVPKVIDAFVLGHFK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaacagcaatacttgatccaaaacaccgcatacagcttatgagatttctt
cacactggtaatgaagttcccaagtactttccgggctgttgggcagcccacaaatacttc
gaagttgacagcttgcagacccttgacttcgcactggctaatagtgtgaacaatgttgaa
gttgtggagatcatacttaaggcatacaaagatgggtggtacacgagatttgaaacgatc
gcgttcgctctcacaaagtgcctgttggtgggcagttctgaagtcaaagccgccacctac
aaagctgtcggtcagatttgtaacaccccagaacagatgatgctattctgcaaatacaca
aggcttttgaaaacaggtaatggccgaggttggtgcaagatcgtcagcaactggtacacg
tccaaggaccctatggagttggctaaggacgtgagcagagtgaaggcgcgtcacgggcgc
tcccacaatacgcttcttcgtaagagccacgtgaagataccaccaaatgataaatcgcgc
gacgccatcgtcaaatacgctatctacggtctgaagaaagctaaacagttagttggagag
cacgaggaatcgaaagcggtgttcgactacatccaaaaggtggaagatttgcgtcactgc
gaggaccctgtcgcggcagcggccatggtcgcacagcatcagttcacgctcgaacacgtg
ccggggcatctgctgatctcgcaagatgtctgggattcggtgctacctcacttggatcta
cacgagctgctatacaacgtccaacgcgtccacaacatgggcttcttgaccagcgaatcc
cctaccaccgccatcttgatatcgctcctcactaacaacgaactcgttaagaaatcgaag
gtgacaccgattgaagtcttcatcactctgaacaactacaaaatgaagtgcaggccaatg
aaacacgaaaaggcaaaagtggctgttgagaaggagaggcgtcgccgcacgcgacagata
tttgacagcaaaaccgggctctgggagtggtcagtaacaaggcggcatcccaaggaggtc
aagcattggggtatcgaccagcccccgaaccaagccgtgataaatgccctcacaaacctg
attgacatgacctgggtgctgacacccaaaactggtgctcgctacatgatcaccatggat
ttgagagcgcacatgttcagaggccgtcacttctgcaagaacttcgtgatccccaaaaag
ggtagaaagacctctttgaccaagacgacgcccaccgcagccggtggcggcgatgcggaa
tccgagaagaaatccaagaaacacgtattggccgagtgcttctataacaagcatgttaca
cccgggcacgcggctataatcatggcgcttcaaatattgaagcgggaggacaccgtaaag
ctggcggtgttcaccgacgacggagtgcaaatcatgaatgttgacaagaaatctgctaac
atcgagaaagcggaggtgattctaaggaaaggcaaccttggccgcgtgcaactggacgct
ccaatcgaatgggcagccaagaagaagaacaagttcgacgtcttcataaacatggtggac
aggaccactcgctacatggagttggaccaggaccagaggggggggcgcgggccgggaggc
aggttcggccctcccccgccggccgccgcggagctggtcgatcactgccccgtgagagct
ctcatacgctacagggccaatattgcagctaacgccaagctggtagttatgtcgctggca
tcccaccgcgtcgcgaccacaaatggcagccacgaaggcgttctcgacattatcggcatc
gacgaacacgtaccaaaggtgatagacgccttcgtcctcgggcatttcaagtaa
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