Choristoneura fumiferana (eastern spruce budworm): 141445589
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Entry
141445589 CDS
T11020
Symbol
mre11
Name
(RefSeq) double strand break repair nuclease mre11
KO
K10865
double-strand break repair protein MRE11
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03440
Homologous recombination
cfum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141445589 (mre11)
03450 Non-homologous end-joining
141445589 (mre11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141445589 (mre11)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141445589 (mre11)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
141445589 (mre11)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
141445589 (mre11)
BRCA1-C complex
141445589 (mre11)
NHEJ (non-homologous end-joining)
MRX complex
141445589 (mre11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
141445589
NCBI-ProteinID:
XP_073967531
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Position
2:complement(22614366..22617128)
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AA seq
622 aa
AA seq
DB search
MLDTVSWNPDNTLKILIASDIHLGHQENDPVRGEDSFVAFEEVLSQAAARDADLVLLGGD
LFDHAKPSPACMYKCTELIRRYCLGDRPVRVELLSDQLQNFSRSVNYEDPNLNVSYPILS
IHGNHDDPVGQRGVSSLDILSMTGLVNYFGKWSDYTQVRISPVLLQKGSTRLALYGLSHL
KDQRLARLFAEKKVEMEMVDDSNDWFNMLVLHQNRADRGPGNYIPEKVLPKFLDMVVWGH
EHDSLVSPMKGEKNDDFTVVQPGSTVATSLAAGEALQKHCALLEIHGTSYKVHPIPLKTV
RPFIFKTIVLSEEDLGEEEVNENEKVQEFLRGKVNEAIEEADRLRSGDPKQPALPLVRLS
VFYERPSQDFNRMRFGQNFNGQVANPNDLLVMKREKKYRERKEGGGDAEPVDVARAAHEA
PDVEALLGAYYAALGPARAPAVLCPRAATEAVRDFTLKHDDSVFRRVFAALRRRAVDALM
DSTAETDDEITDCLRRARDVLDATELDQLKMLVDLHGAPAPAPAARGKAPAAKGKPVVVL
SSDDELLEPRGGKATRARGRAAARGRGRGRPAASPAPEPVPAPAPSPQERRTPRRAAQKN
SWLSNVAANRANNRSSSMDDSD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttggacactgtcagttggaacccagacaacacgttaaaaatcctgatagcctctgat
attcatctggggcaccaggagaacgacccggtgcgcggtgaggatagcttcgtggctttc
gaggaggtgctgtcgcaagcggcggcgcgcgacgcggacctggtgctgctgggcggcgac
ctgttcgaccacgccaagccgtcgcccgcctgcatgtacaagtgcacggagctgatccgg
cgctactgcctcggcgaccggcccgtacgcgtcgagctgctgtccgaccagctgcagaac
ttctcgcgctcggtcaattacgaggaccctaacctcaacgtgtcgtaccccatcttgtcc
atccacggcaaccacgacgaccccgtgggccagcgcggcgtcagctcgctcgacatcctt
tccatgactgggctcgtaaactacttcggcaagtggagcgactacacgcaggtgcgcatc
tcgcccgtgctgctgcagaagggctccacgcgactcgcgctctacggcctgtcccacctc
aaggaccagcgcctcgcacgcctgttcgccgagaagaaagtggagatggaaatggtggac
gacagcaacgactggttcaacatgttggtgctgcatcaaaaccgtgcagaccggggccca
ggaaattacataccagaaaaagtgttgccaaagttcttggacatggtcgtctgggggcac
gagcatgatagccttgtgagtccaatgaaaggtgaaaagaatgatgatttcaccgttgtc
cagccgggcagtaccgtggccacatccctggccgccggggaggctcttcagaagcattgc
gctctgctagaaattcacggaacgagctacaaggttcaccccatacctttgaaaacagtg
cggcccttcattttcaagaccatcgtgctgtccgaagaggacctcggggaggaggaagtc
aatgaaaatgaaaaagtacaagagttcctgagaggcaaagtcaacgaagccatagaggag
gcggacaggctccgcagcggggacccgaagcagcccgccctccccctcgtgagactgagc
gtcttttacgagaggcccagccaggacttcaacaggatgcgtttcgggcagaatttcaac
ggacaagtggccaacccgaacgatctgctggtgatgaaacgcgagaagaagtatcgcgag
cgcaaggagggcggcggcgacgcggagcccgtggacgtggcgcgcgccgcgcacgaggcg
cccgacgtggaggcgctgctgggcgcgtactacgcggcgctgggccccgcgcgcgcgccc
gctgtgctgtgcccgcgcgccgccaccgaggccgtgcgcgacttcacgctcaagcacgac
gacagcgtgttccggcgcgtgttcgccgcgctgcgccgccgcgccgtcgacgcgctcatg
gactccacggccgagaccgacgacgagatcacggactgtctgcggcgcgcgcgcgacgtg
ctcgacgccaccgagctggaccagctcaagatgctcgtggacctgcacggagcgcccgcg
cccgcgcccgccgccaggggcaaggcgcccgccgccaagggcaagcccgtggtggtgctg
tccagcgacgacgagctgctggagccgcgcggcggcaaggccacgcgcgcgcgcgggcgg
gcggcggcccgtgggcgcgggcgcggccgcccggccgcctcgcccgcgcccgagccggtg
cccgcccccgcgccgtctccgcaggagcgccgcacgccgcgccgcgccgctcagaaaaac
tcctggctgtccaacgtggccgcaaatcgcgccaacaatcgctcctcgagcatggacgac
tctgactag
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