Cystobacter fuscus: CYFUS_000951
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Entry
CYFUS_000951 CDS
T05065
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cfus
Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfus03021
]
CYFUS_000951
Transcription machinery [BR:
cfus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CYFUS_000951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
RapA_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATB35538
UniProt:
A0A250IW88
LinkDB
All DBs
Position
1135993..1139034
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AA seq
1013 aa
AA seq
DB search
MSFVSGNKVRYLPQPEWGVGHLLELQDEGAKALVLFPAREGEPVLVSTKGGALVPYRLTK
GEPVKTARGRRATVVGEEEGGRGLRRYVIRYADTGEEDELPESEVHALAPRSDVLSTLRE
GRVGEARAFMLRKQALQLDDERRCDALGALLASRVMVKPHQVGVVQRVLSARRPRFVLAD
EVGLGKTIEAGMVFSALRLSGLARRVLVVAPSHLTVQWLVELFHKFNQLFTLMDSDRYAS
SLKEQPQVSPWARFPLVVTSLEMLARSEEHRRAVAGEDAFWDLVIIDEAHHLKGEKAFAA
AEGLAANSWGLLLLTATPMQLDPAEYHGLLTLIDAATAPTVAGFEQRLARQEELSTAVRG
LLEGQDAKGAVKALAARFPDDPRLTTLKDRDALLQHLAETYSLSDRLVRNRRAVVGGFST
RRLHRHPVKLSAEELRTRDAALAALASSTLRGAPLGNLLRRLESSPAAFAEALQGNKALA
SVAGSLKLPARDAKFGAFQEVLRGIWSAEPRAKVLVFTESRDTLESLRAELGREGTEALA
YHGDLPLVERDRQVARFRDPEGPLVLLCTEVGGEGRNFQFAHHLVHYDLPWSPATVEQRI
GRLDRIGQNHPVEIHVFDPAGTLAADVLMLLADAVGVFGETVGGLDAVLEEVEPRLAELA
ILPRESRVAYAAELKVKVEAARAQVKRAYDPLLDIRSFDKDAVARLVKRAQERMGLEEDE
EEEAAPSLEEGLWSVARDLDERLEESVTELARRVGIGVDTDEQVDAFQCAFQFGHALKVE
GLPGIDINEDRTVLGTFWRDTAVEAEELEYYATGHPIVESLFGFLRDGPYGRSAARFIEK
RGPLKARGVELLYHVQLPEPEDTSPGARVPSRQLARFLERTLVHVAVVEGPSGPKVDTGV
LGALEAEGKSLKGDEVARAFPGFAAFVDAGVPVALKAAEAELGKLQTRARKAVEAERDAA
LARMKLSLTHQGLEEKAVRAQLDAEHEHYERLLQALAGAKVVLDSACGFVINR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtttcaggcaacaaggtccgctacctcccccagcccgagtggggcgtgggg
catctcctcgaattgcaggacgagggcgccaaggcgctcgtcctcttccccgcccgggag
ggcgagccggtgctggtgtccaccaagggtggcgccctggtgccctatcgcctgaccaag
ggcgagcccgtgaagacggcccggggccggcgcgccaccgtggtgggtgaggaggaaggc
ggccgcggtctgcgccgctacgtcatccgctacgccgacacgggcgaggaggacgagctg
cccgagtccgaggtgcacgcgctcgccccgcgctcggacgtgctgtccacgctgcgcgag
ggccgggtgggcgaggcacgggccttcatgttgcgcaagcaggcgctgcaactggacgac
gagcgacggtgtgatgcgctcggcgcgctgctggccagccgggtgatggtgaagccgcac
caggtgggcgtggtgcagcgcgtgctcagcgcgcgccggccccgcttcgtgctcgccgac
gaggtgggcctgggcaagacgatcgaagcgggcatggtgttcagcgccctgcggctgtcc
gggctcgcgcggcgcgtgctggtggtggcccccagccacctcaccgtgcagtggctggtg
gagctgttccacaagttcaaccagctcttcacgctcatggactcggaccggtacgcgagc
tcgctcaaggagcagccccaggtgtccccgtgggcgcgcttccccctggtggtgacgagt
ctggagatgctcgcccggagcgaggagcaccggcgcgccgtggcgggcgaggacgcgttc
tgggacctggtcatcatcgacgaggcacaccacctcaagggcgagaaggccttcgcggcc
gccgagggcctggcggccaacagctggggcctgctgctgctcacggccacgcccatgcag
ttggatccggccgagtaccacgggctgctcacgctcatcgacgcggcgacggcgcccacg
gtggcgggcttcgagcagcggctggcgcggcaggaggaactgagcacggcggtgcgcggg
ctgctcgagggccaggacgccaagggcgcggtgaaggccctggcggcgcgcttcccggac
gacccgcggctcacgacgctcaaggatcgggacgcgctcctgcagcacctggcggagacg
tacagcctgtcggaccggctggtgcgcaaccggcgcgcggtggtgggcggcttctccacg
cgccggctgcaccggcatccggtgaagctgtccgccgaggagctgcgcacgcgcgacgcc
gcgttggccgcgctcgcctcgtccaccctgcgcggcgcgcccctgggcaacctgctgcgc
cgcctggagtcgagccccgcggccttcgccgaggcactccagggcaacaaggcgctggcg
agcgtggccggctcgctcaagctgcccgcgcgcgacgcgaagttcggcgccttccaggag
gtgctgcgcggcatctggagcgcggagccccgcgccaaggtgctcgtgttcaccgagagc
cgtgacacgctcgagtcgctgcgcgcggagctgggccgcgagggcaccgaggcgctcgcc
taccatggcgatctgcccctggtggagagagacaggcaggtggcgcgcttccgcgatccc
gagggcccgctggtgctcctgtgcaccgaggtgggtggagagggtcgcaacttccagttc
gcgcaccacctggtgcactacgacctgccgtggagcccggcgacggtggagcagcgcatc
gggcgtctggatcgcatcgggcagaaccacccggtggagatccacgtcttcgatcccgcg
ggcacgctggccgcggacgtgttgatgctgctggcggacgcggtgggcgtcttcggcgag
acggtgggtggcctggacgcggtgctggaggaggtggagccgcggctggccgagctggcg
atcctgccgcgcgagtcgcgcgtggcgtacgccgcggagctcaaggtgaaggtggaggcg
gcgcgggcgcaggtgaagcgcgcgtatgatccgctgctggacatccgctcgttcgacaag
gacgcggtggcgcggctggtgaagcgggcgcaggagcgcatggggctggaggaggacgag
gaggaggaggccgcgccgagcctggaggaggggctgtggagcgtggcgagggatctggac
gagcggctggaggagtcggtgacggagctggcgcgccgggtgggcatcggcgtggacacg
gacgagcaggtggatgccttccagtgcgccttccagttcggccacgcgctcaaggtggag
ggcctgccgggcatcgacatcaacgaggaccgcacggtgctgggcaccttctggcgcgac
acggcggtggaggccgaggagctggagtactacgccacgggccaccccatcgtggagtcg
ttgttcggcttcctgcgggacgggccgtacgggcgcagcgcggcgcggttcatcgagaag
cgcgggccgctcaaggcgcggggcgtggagctgctctaccacgtgcagctgcccgagccc
gaggacacctcgccgggcgcgcgggtgccgagccgtcagctcgcgcgcttcctggagcgc
acgctggtgcacgtggcggtggtggagggcccctcgggtcccaaggtggacacgggggtg
ctcggcgcgctggaggcggagggcaagtccctcaagggggacgaggtggcgcgtgccttc
ccgggcttcgcggccttcgtggacgcgggcgtgccggtggcgctcaaggccgccgaggcg
gagctgggcaagctccagacgcgcgcgcgcaaggccgtggaggccgagcgggacgcggcg
ctcgcgcgcatgaagctgtcgctcacgcaccagggactggaggagaaggcggtgcgggcg
cagctcgacgccgagcacgagcactatgagcggctgctccaggcactcgccggggccaag
gtggtgctcgactcggcctgcggcttcgtcatcaaccgctga
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