Cystobacter fuscus: CYFUS_001272
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Entry
CYFUS_001272 CDS
T05065
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cfus
Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_001272
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYFUS_001272
Archaeal homologous recombinant proteins
CYFUS_001272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ATB35858
UniProt:
A0A250IX47
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All DBs
Position
1522752..1526537
Genome browser
AA seq
1261 aa
AA seq
DB search
MKILVIRGRNLTSLAGDFALELDKPPLDRMGLFAITGATGAGKSTLLDAMCLALFDCTPR
LEQGGGVLVGRAGEDEKARVKDTDARGMLRRGAAEGLAEVEFLGRDGKRYVANWSVRRAH
KRLDGAIQSPEMSLTEVASGQRFGAKKGEVLKAIEEKLGLSFEQFRRSALLAQGEFAAFL
RAKEKDRAELLERMTGTEVYSRMSLAAHQRHRQVQEALEKLQRGVEAISLLSEEARRQEE
EGLAREEAARAEAQAVQSRAEHAVGWYRTRADLVSREREAEAELERARRALEDAEPRRLE
WERVRAAEDLRAPVSALDEATAALTARDAELTARRSEEAVAREVDRGAEVVRLEAESRRD
AAVKAEEAARPELEAAEALDGEIQRAEEQARDAVRARDEALASEQRARAELSVLSDQEAS
ARKRLEDIQAWRDKRGPVEPVAREWSRWETELQRYQQQARQEVAAQALLTRTRAEAEPLR
LEAERREAARRESSEALRVAEEEAARAESALGAEADAARRLRREELGARQEVLKELELAR
KEAWEAAQALREASREVDEARKEQATATAEAEAAKARRTGLDPALREARLAFDRTRAALE
LSARRADLREGEPCPLCGSKEHPYAREEGPLAGLVEEGRGRVTSLENELQEVTRTESAAT
ARAQGAEQRAARAEERGEAAARRSTSPRERWSLLRAKLTGALPAESVDAPEVEAWLAEAL
AEVRVHSERSRAEEELAEAQARKAKEARVRREAARTDAEAAESLWRQADEAWRRNVEAEA
LHLRDVEQAARGREELLAALSVAFSGWPRWEKELSTDTATFQARCVKAVKEWNAKDEELR
QAEAESRSAAEKRGPVQATVELLHAQSTARAQAATGREEALARARASRGALFGGRATAEV
RAALRQEREALVQALESRREDAARAARAVAVALARTEASLAARDTASTSRDRAEATLGTR
LAERGLSLETVRSLLSRGAAWCADEERVLGQLRQAHDKSLLLVEERQRQRLEHESSARPS
LSEEEAASARERAIADTQARVDAAARLRARLKQDDDARRSHGEQARLLEEAQRKSGVWRT
LSELIGSHDGKKFKVFAQSLTLDALLHHANAHLEQLAPRYHLMRVPGYDLDLQVVDRDMG
DEVRAVSSLSGGESFLVSLALALGLASLSSETTQVETLFIDEGFGTLDPETLEVALATLD
ALQATGRQVGIISHVSGLAERIGVQVRVVKQGAGRSRLQVVGEAGLPGARASASRRSLAM
G
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgtcatccggggtcgcaacctcacgagcctcgcgggcgacttcgccctg
gagctggacaagccgccgctcgatcgcatggggctgttcgccatcaccggcgccacgggc
gcgggcaagagcaccctgttggacgccatgtgcctggccctcttcgactgcacgccccgg
ttggagcagggcggcggggtgctcgtgggacgcgccggggaggacgagaaggcgcgcgtc
aaggacaccgacgcgaggggcatgttgcggcgcggcgccgccgagggcctcgccgaggtg
gagttcctcggacgcgatgggaagcgctacgtggccaactggtccgtgcgccgggcgcac
aagcggctggatggcgccatccagtctccggagatgagcctcaccgaggtggcgtccgga
cagcgcttcggtgccaagaagggcgaggtgctcaaggccatcgaggagaagctcggcctg
tccttcgagcagttccggcgctcggcgctgctggcccagggcgagttcgccgccttcctg
cgcgccaaggagaaggaccgcgcggagctgctcgagcgcatgacgggcacggaggtgtac
agccgcatgtcgctcgccgcgcaccagcgccaccgccaggtgcaggaggcgctggagaag
ttgcagcggggcgtggaggccatctccttgctgagcgaggaggcgcgccggcaggaggag
gagggactggcgcgcgaggaggcggcgcgcgcggaggcccaggcggtgcagtcccgcgcg
gagcacgcggtgggctggtaccggacgcgggcggacctggtttcccgtgagcgcgaggcg
gaagcggagctggagcgcgcgcggcgggccctcgaggacgcggagccccggcggctcgaa
tgggagcgggttcgcgcggcggaggacctgcgtgctccggtctcggcgctggacgaggcc
acggcggccctgacggcgagggacgcggagctgaccgcgcggcgctccgaggaggcggtg
gcgcgcgaggtggatcgcggggccgaggtggttcggctcgaggcggagtcccggcgggac
gcggcggtgaaggcggaggaggccgcgcggccggagctggaagcggccgaggcgttggat
ggggagatccagcgcgccgaggagcaggcgcgggacgcggtgcgtgcgcgggacgaggcg
ctcgcgagcgagcagcgggcccgggccgagctctcggtgctgagcgaccaggaagcctcc
gcgcgcaagcggctcgaggacatccaggcgtggcgggacaagcgcgggcccgtggagccc
gtggcccgggagtggtcccggtgggagacggagctccagcgctatcagcaacaggcacgg
caggaggtcgcggcccaggcactgctcacgcgcacgcgcgccgaggccgagccgcttcgc
ctcgaggcggagcgccgtgaggcggcgcggcgcgagtcgtccgaggcgctgcgtgtggcc
gaggaggaggccgcgcgggcggagtcggcgctcggcgcggaggccgacgcggcgcggagg
ctgcggcgtgaggagctgggtgcccggcaggaggtgttgaaggagctggagctcgcgcgg
aaggaagcgtgggaagcggcccaggcgctgcgcgaggcctcccgggaggtggacgaggcc
cggaaggagcaggccaccgcgaccgccgaggcggaggccgcgaaggcgcggcgcaccggg
ctcgacccggcgctgagggaggcacggctcgcgttcgaccggacgcgggccgcgctggag
ctcagcgcgcgtcgggcggacctgcgcgagggcgagccctgtcccctgtgtggttccaag
gagcacccctacgctcgcgaggaagggcccctggcgggactcgtcgaggaggggcgcggc
cgggtgacgtcgttggagaacgagctccaggaggtgacgcggaccgaatccgccgccacc
gcccgggcccagggcgcggagcagcgcgcggcgcgggccgaggagcgtggggaggccgcg
gcgcggcggagcacctcgccccgcgagcgctggagcctcttgcgcgcgaagctcacgggt
gcgcttcccgccgagtccgtggatgccccggaggtcgaggcctggctggcggaggcactc
gccgaggtgcgcgtccactccgagcggtcgagggccgaggaggaactcgccgaggcccag
gcccggaaggcgaaggaggcccgggtccggagggaggccgcgcggacggacgcggaggcg
gcggagtcgctctggcgccaggcggacgaggcgtggcgcaggaacgtcgaggccgaggcc
ctgcacctgcgggacgtggagcaggcggcgcgcggtcgcgaggagctgctggccgcgctg
tcggtggccttctcgggctggccccgttgggagaaggagctgtccaccgacacggcgacc
ttccaggcgcgctgcgtgaaggccgtgaaggagtggaacgcgaaggacgaggagctgcgc
caggccgaggccgagtcgcggagcgcggcggagaagcggggcccggtgcaagccacggtg
gagctgctgcacgcgcagagcacggcccgtgcccaggccgcgaccgggcgggaagaggcc
ctcgcgcgcgcgcgcgcctcacgtggggcgctgttcgggggacgtgccaccgccgaggtg
cgcgcggcccttcgtcaggagcgggaggcgctcgtccaggccctcgagtcccggcgcgag
gacgccgcgcgggcggcacgggccgtggcggtggcgctcgcccggaccgaggcctcgctc
gcggcacgggacacggcgagtacctcccgggacagggccgaggccaccctgggcacgcgc
ctcgccgagcgcggcctctccctggagaccgtgcggagcctgctctcgcggggcgccgcc
tggtgcgcggacgaggagcgggtgctgggccaactgcggcaggcccacgacaagtccctc
ctgctcgtcgaggagcgccagcgccagcgcctcgagcacgagtcctccgcgcggccctcc
ctctccgaggaggaggccgcgtccgcgcgcgagcgggccatcgcggacacccaggcccgt
gtggacgccgccgcccgcctccgggcccggctcaagcaggacgatgacgcccggcggagc
cacggcgagcaggcccggctgctggaggaggcgcagcgcaagagcggcgtgtggcgcacg
ctcagtgaactcatcggctcgcatgacggcaagaagttcaaggtgttcgcccagagcctc
accctggacgcgctcctgcaccacgccaacgcacacctcgagcaactggcgcctcgctac
cacctcatgcgtgtgcctgggtacgacctggacctccaggtggtggatcgagacatgggc
gacgaggtgcgcgccgtctccagcctctccggcggagagagcttcctcgtctcgctcgcg
ctcgccctcggcctcgcctcgctctcctcggagacgacccaggtggagacgctcttcatc
gacgagggcttcggcacgctggaccccgagacgctggaagtggccctggccacgctcgac
gcgctccaggccacggggaggcaggtgggcatcatctcccacgtgtcggggctcgccgag
cgcatcggtgtgcaggtacgcgtggtgaagcagggcgcgggtcgcagccgcctccaggtc
gtgggcgaagcgggcctgccaggtgctcgggcgtccgcgtcccggcgctcgctggcgatg
ggatag
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