Cystobacter fuscus: CYFUS_002221
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Entry
CYFUS_002221 CDS
T05065
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus00061
Fatty acid biosynthesis
cfus00071
Fatty acid degradation
cfus01100
Metabolic pathways
cfus01212
Fatty acid metabolism
cfus02024
Quorum sensing
cfus04146
Peroxisome
Module
cfus_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CYFUS_002221
00071 Fatty acid degradation
CYFUS_002221
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CYFUS_002221
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYFUS_002221
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfus01004
]
CYFUS_002221
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfus04147
]
CYFUS_002221
Enzymes [BR:
cfus01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CYFUS_002221
Lipid biosynthesis proteins [BR:
cfus01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CYFUS_002221
Exosome [BR:
cfus04147
]
Exosomal proteins
Exosomal proteins of breast milk
CYFUS_002221
Exosomal proteins of breast cancer cells
CYFUS_002221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Acyltransferase
PP-binding
AMP-binding_C
Sterile
AMP-binding_C_3
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ATB36806
UniProt:
A0A250J0W2
LinkDB
All DBs
Position
complement(2690595..2695004)
Genome browser
AA seq
1469 aa
AA seq
DB search
MSSPELNVTEVFTGKRLLFSGSTGFVGKVTLSMILSRYGEQLDKLYVLVRKGSAPSAERR
FFDKVATSEPFQPLRDAHGDEGALEFLRRKVQVLDGDITDPLMGLTPEQADALVGQVHAI
INCAGLVSFNPSLEVGLNVNTHGVKNTVELALKWKVPLVHMSTAFVAGNRNGLVFEDEDV
VGYFPRQDELDGRDFSLAQELADADKIVARLREQADDKTLTSLFRKKALERLEQEGRDAS
DEKTLRLAVGRERKLWLSGELVRAGMDRARHWGWPNTYTYTKSLGEQVMASTPGLRYAIV
RPSIVESAQHFPFPGWNEGFTTSAPLAFAGIKGQRNIPAGDKAILDIIPVDHVAGATIGI
TAHSMKVEERRVYHLSSGDVNPFYASRSIELVGLYRRRYYRNKETGNALMNELRSRIEPM
PASRFVFENFSAPMFVKGARLLRQVIDEVKPAWGAPKVQAVMERAREALTEVEEQGEGLM
GLIDLFMPFLYDNRYVFRCDNTRSVYAHMAPHDRARIPWAPEAIDWRVYFLDTHLPGLEK
WVFPGLEEETKRRTVIPAHRDLLEMLEASVNAWRHRVAFRFAANEKEERFTYGEVNRYAN
RVGSFLMKEGVKRNERVMLLSENRPEWPISYFGILRAGGTAVPVDSSLNEAEVVNIARRS
EARVLLVSEETATEMPNLAELLTQAGLSTRVASLAEAMSGDPAYPDNIGPVRHTAAADDV
ASLIFTSGTTGTPKGVMLTHRNFASLIAKLAGAFAIGVGDGVLSVLPLHHTFEFSAGFLT
PFSRGAEVTYIDELTSDKLGEVFETGRVSAMIGVPALWQLLHRKVTQEMASRPPLVEQAL
KTLMATHGELRNRSNLNLGKLLFWPVHRKFGGKIKFLVSGGSALPDDVHKAFHQLGFNII
EGYGLTEAAPVLTVSETNVNKRLAGTVGKALPGIELRILEPDNEGIGEVIARGPSVMAGY
FGDKESTDAVLKEGWLYTGDLGRIDAEGRLYLVGRKKDVIIDANGKNVYPDELEEVYGDH
PHIKELSIVGLPDEAGGEKVACLCVPDYLERPREEVRRELEEHFRKKGHEMPFYRRVKVL
RFTDLELPRTSSRKVKRKQVVEEFKKLERLVASGDKARERVQHAGTGGVADWLYPLLAEV
VNRPLADIRPEAHLSGDLGVDSLMLTELSVALEQAGVPLPSANDLTHVQTVEDLRKLVLT
SGRKPSVETRAKDISREVQKSDEVEIPVPEPLVTLGRQAVRLGQQAIFGGLFDVKVTGKP
FIPQNRNFLVIANHTSHLDMGLVKLVLGEQGQRLTTIAARDYFFDTPLKRAYFENFTDLI
PMDRHGSLRESLRMAGSALQQGYNLLIFPEGTRSVTGELLEFKPTLGYLSLTYNVDVLPI
YLKGAYEALPKGRILPKARELEGHIGPVLTHEMLRAKTHGMSRSESYRYATRLAEDAIRA
LAAGRVLSFDDSATVEDQRRALSTERSDS
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccccgagctgaacgtcaccgaggtcttcaccggcaagcgcctgctgttctcg
ggctccaccggcttcgtgggcaaggtcaccctgtccatgatcctgtcgcgctacggcgag
cagctggacaagctctacgtgctcgtgcgcaagggcagtgccccgtccgccgagcggcgc
ttcttcgacaaggtggccaccagcgagcccttccagccgctgcgcgacgcgcacggcgac
gagggcgcgctcgagttcctgcgccgcaaggtgcaggtgctcgacggtgacatcaccgat
ccgctcatgggcctgacgcccgagcaggccgacgcgctcgtgggccaggtgcacgccatc
atcaactgcgcgggcctggtgtccttcaacccctcgctggaggtgggcctcaacgtcaac
acccacggcgtgaagaacaccgtggagctggcgctcaagtggaaggtgccgctggtgcac
atgtccaccgccttcgtggcgggcaaccgcaacgggctcgtcttcgaggacgaggacgtg
gtgggctacttcccccgccaggacgagctggacggccgcgacttcagcctcgcgcaggag
ctggcggacgcggacaagatcgtggcccggctgcgcgagcaggccgacgacaagacgctc
acgtccctcttccgcaagaaggccctggagcggctggagcaggagggccgcgacgccagc
gacgagaagacgctgcggctggccgtgggccgcgagcgcaagctgtggctgtccggcgag
ctggtgcgcgcgggcatggaccgggcgcgccactggggctggcccaacacgtacacgtac
accaagagcctgggcgagcaggtcatggccagcacccccggcctgcgctacgccatcgtc
cggccctccatcgtcgagtccgcccagcacttccccttccccgggtggaacgagggcttc
accacctcggcgccgctcgccttcgccggcatcaagggccagcgcaacatccccgccggg
gacaaggccatcctggacatcatcccggtggaccacgtggccggcgccaccatcggcatc
accgcccactccatgaaggtggaggagcggcgcgtctaccacctgtccagtggcgacgtg
aatccgttctacgcgagccgctccatcgagctggtcggcctctaccgccgccgctactac
cgcaacaaggagacgggcaacgcgctgatgaacgagctgcgctcgcgcatcgagcccatg
ccggccagccgcttcgtcttcgagaacttcagcgcccccatgttcgtcaagggcgcgcgc
ctgctgcgccaggtgatcgacgaggtgaagcccgcctggggagcccccaaggtgcaggcc
gtcatggagcgcgcgcgcgaggcgctcaccgaggtggaggaacagggcgagggcctcatg
gggctcatcgatctgttcatgcccttcctctacgacaaccgctacgtcttccgctgcgac
aacacgcgctcggtctacgcgcacatggcgccgcatgaccgggcccgcatcccctgggcc
cccgaggccatcgactggcgcgtctacttcctcgacacccacctgcccggcctggagaag
tgggtgttcccggggctcgaggaggagacgaagcggcgcaccgtcatccccgcccaccgc
gacctcctggagatgctggaggcgagcgtcaacgcgtggcgccaccgcgtcgccttccgc
ttcgcggcgaacgagaaggaagagcgcttcacctacggcgaggtgaaccgctacgccaac
cgcgtgggcagcttcctgatgaaggagggcgtcaagcgcaacgagcgcgtgatgctcctg
tcggagaaccggcccgagtggcccatctcctacttcggcattctgcgcgcgggcggcacc
gcggtgcccgtggactcgagcctcaacgaggccgaggtggtgaacatcgcccgccgctcc
gaggcgcgggtgctgctcgtctccgaggagacggccacggagatgccgaacctcgccgag
ctgctcacccaggcgggcctgtccacgcgcgtggccagcctcgccgaggcgatgagtgga
gacccggcgtacccggacaacatcggcccggtgcgccacacggccgccgcggacgacgtg
gccagcctcatcttcacctcgggcaccaccggcacgcccaagggcgtgatgctcacccac
cgcaacttcgcctcgctcatcgcgaagctggcgggcgcgttcgccatcggggtcggcgac
ggggtgctctccgtgctgcccctgcaccacaccttcgagttctccgccggcttcctcacg
cccttctcgcgcggcgccgaggtgacgtacatcgacgagctgacgtcggacaagctcggc
gaggtgttcgagacgggccgcgtgtcggcgatgatcggcgtgcccgcgctctggcagctt
ttgcaccgcaaggtgacgcaggagatggccagccgcccgcccctggtggagcaggcgctc
aagacgctgatggccacccacggcgagctgcgcaaccgcagcaacctcaacctgggcaag
ctgctcttctggcccgtgcaccgcaagttcggcgggaagatcaagttcctcgtgtccggc
ggctcggcgctgccggatgacgtgcacaaggccttccaccagctcggcttcaacatcatc
gagggctatggcctcaccgaggccgcccccgtgctcacggtgtccgagacgaacgtcaac
aagcgcctggcgggcacggtgggcaaggcgctgccgggcatcgagctgcgcatcctcgag
ccggacaacgagggcatcggcgaggtgatcgcccgcggcccgagcgtcatggcgggctac
ttcggcgacaaggagtccaccgacgccgtcctcaaggagggctggctgtacaccggagac
ctgggccgcatcgacgccgagggccggctgtacctggtggggcgcaagaaggacgtcatc
atcgacgccaacgggaagaacgtgtacccggacgagctcgaggaggtgtacggcgaccac
ccgcacatcaaggagctgtccatcgtggggctcccggacgaggccggtggcgagaaggtc
gcctgcctgtgcgtgccggactacctcgagcggccgcgcgaggaggtgcggcgcgagctg
gaggagcacttccgcaagaagggccacgagatgcccttctaccgccgggtgaaggtgctg
cgcttcacggacctggagctgccccgcacgtcctcgcgcaaggtcaagcgcaagcaggtg
gtggaggagttcaagaagctggagcggctcgtcgcctccggggacaaggcgcgcgagcgc
gtgcagcacgcgggcaccggtggcgtggccgactggctctacccgctgctcgccgaggtg
gtgaaccgacccctcgccgacatccgccccgaggcccacctgagcggggacctgggcgtg
gactcgctcatgctcaccgagctgtccgtggccctggagcaggcgggagtgcccctgccc
tccgcgaatgatctcacgcacgtgcagacggtggaggacctgcgcaagctcgtgctcacc
agcggccgcaagccgagcgtggagacgcgcgccaaggacatctcccgcgaggtccagaag
agcgacgaggtggagatccccgtccccgagcccctcgtcaccctgggccggcaggcggtg
cggctcggccagcaggccatcttcggcggcctgttcgacgtgaaggtgacgggcaagccc
ttcatcccccagaaccgcaacttcctcgtcatcgccaaccacacgagccatctggacatg
gggctcgtcaagctggtgctcggcgagcagggccagcggctcaccaccatcgccgcgcgc
gactacttcttcgacacgcccctcaagcgcgcgtacttcgagaacttcacggacctcatc
cccatggaccggcacggctcgctgcgcgagtcgctgcgcatggccggcagcgccctgcag
cagggctacaacctgctcatcttccccgagggcacgcgctcggtgacgggcgagctgctc
gagttcaagcccacgctcggctacctgtcgctcacctacaacgtggacgtgctgcccatc
tatctcaagggcgcctacgaggccctgcccaaggggaggatcctccccaaggcgcgcgag
ctggagggccacatcggccccgtgctcacgcacgagatgctgcgcgccaagacgcatggc
atgtcgcgctcggagagctaccgctacgccacccgcctcgccgaggacgccatccgggcg
ctcgccgcgggccgggtgctcagcttcgacgactcggcgacggtggaggaccagcgccgc
gccctgtccacggaaaggagtgactcgtga
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integrated database retrieval system
