Cystobacter fuscus: CYFUS_002971
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Entry
CYFUS_002971 CDS
T05065
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cfus
Cystobacter fuscus
Pathway
cfus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYFUS_002971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_002971
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYFUS_002971
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CYFUS_002971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA_30
UvrD-helicase
UB2H
KOW6_SPT5
Kinesin
P-loop_SecA
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
ATB37549
UniProt:
A0A250J0P5
LinkDB
All DBs
Position
3647240..3649405
Genome browser
AA seq
721 aa
AA seq
DB search
MPEFQIVSDYKPQGDQPRAIGELTEGVLRGDRYQTLLGVTGSGKTFTMANLIANVKRPTL
LIAHNKLLAAQLYGEYKALFPHNAVEYFVSYFDYYQPEAYIPTSDTFIEKDSSVNDEIER
MRHSATHSLRTRDDVLIVASVSCIYGLGTARSYVDLAVTVNVGAELGRDSFIRRLVESQY
ERNDLDFHRGTFRVRGDTVEVFPAYEEERAVRVSFFGDEVEKITEFDPLRGVTLGALDKV
VVFPASHYVTEADTRKNALLTIRDELGARLQELQRAGKLLEAQRLEQRTIYDLEMIEQIG
YCNGIENYSRHFSGRRTGEPPPCLIDYFPRNMLVLIDESHQTVPQIGAMYRGDRARKETL
VEHGFRLPSALDNRPLKFTEFEEMVQQAVFVSATPAEYELQKSKGVVVEQIIRPTGLTDP
EVEVRPARNQVDDVLEEVRQRVTKNERVLVTTLTKRMAEDLTEYLTEVGVKVRYLHSDIG
AIERTAIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRSHVSLIQTIGR
AARNLNGHVIMYADAVTDSMRVALEETNRRREVQRAYNAEHGITPKAVKSNILDLSEHLY
DGDPTALPMAADSANDVLEPKEIKNLIAQTTKDMQHYADEMEFEKAAAMRDRLLILKDMD
LGLKAPSRALLNAPAKGDDEPKAGTPGGRKGKGYKRASGSSRDKGGGPPHGKTGIGPRKS
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattccagatcgtcagcgactacaagccccagggcgatcaaccgcgtgccatc
ggtgaactcaccgagggagtgctgcggggagatcgctaccagacgctgctgggcgtcacc
ggctcgggcaagaccttcaccatggcgaacctcatcgccaacgtgaagcgccccacgctg
ctcatcgcgcacaacaagctgctcgccgcccagctctacggggaatacaaggcgctcttc
ccccacaacgccgtcgagtacttcgtctcgtacttcgactactaccagcccgaggcgtac
atccccacctcggacaccttcatcgagaaggactcgtcggtgaacgacgagatcgagcgc
atgcgccactcggccacgcactcgctgcgcacgcgcgacgacgtgctcatcgtggcgagc
gtgtcgtgcatctacggcctcggtacggcgcgctcgtacgtggacctggcggtgacggtg
aacgtcggcgcggagctgggccgggactccttcatccgccggttggtggagagccagtac
gagcgaaatgatctcgacttccaccgcgggacgttccgggtccggggcgacacggtggag
gtgttccccgcctacgaggaggagcgcgcggtgcgcgtgagcttcttcggagacgaggtg
gagaagatcaccgagttcgatccgctgcgcggcgtgacgctgggcgcactggacaaggtc
gtcgtcttccccgcgagccactacgtcaccgaggcggacacgcgcaagaacgcgctgctg
accatccgcgacgagctgggtgcgcggctccaggaactccagcgcgcgggcaagctgctg
gaggcacagcggctggagcagcgcacgatatacgacctcgagatgatcgagcagatcggg
tactgcaacggcatcgagaactactcgcggcacttctcggggcggcggaccggagagcca
ccgccgtgcctcatcgactacttcccgcgcaacatgttggtgctcatcgacgagagccac
cagacggtgccgcagattggcgccatgtaccgtggggatcgggcgcgcaaggagacgctg
gtggagcacggcttccgcctgcccagtgcgctggacaaccgtccgctcaagttcaccgag
ttcgaggagatggtgcagcaggccgtcttcgtgtcggcgacgccggccgagtacgagctg
cagaagtccaagggcgtggtggtggagcagatcatccgtcccacgggcctgacggatccc
gaggtggaggtgcgcccggcgcgcaaccaggtggatgacgtgctggaggaggtgcgccag
cgcgtgacgaagaacgagcgcgtgctggtgaccaccctcaccaagcgcatggcggaggac
ctgaccgagtacctcaccgaggtgggcgtcaaggtgcgctacctgcactcggacatcggg
gccatcgagcgcacggcgatcatccgcgacctgcgcaagggcgagttcgacgtgctggtg
ggcatcaacctgctgcgcgaggggctcgacatccccgaggtgtcgctggtggccatcttc
gacgcggacaaggaaggcttcctgcgcagccacgtgtcgctcatccagaccattggccgc
gcggcgcgcaacctgaatggccacgtcatcatgtacgcggatgccgtgacggactcgatg
cgcgtcgccctcgaggagaccaaccgccgccgcgaggtgcagcgcgcctacaacgccgag
cacggcatcacccccaaggcggtcaagagcaacatcctcgatctgtccgagcacctctac
gatggcgatcccacggcgctgcccatggcggccgactcggccaacgacgtgctcgagccg
aaggagatcaagaacctcatcgcgcagacgaccaaggacatgcagcactacgcggacgag
atggagttcgagaaggccgcggcgatgcgagaccggttgttgatcctcaaggacatggac
ctggggctcaaggcgccgagccgcgcgctgctcaacgctccggcgaagggggacgacgag
cccaaggcgggcacgccgggtggacgcaaggggaagggctacaagcgcgcgagcggctcc
tcccgggacaagggcgggggaccgccccacggcaagacgggaatcggcccgaggaagagc
cgctag
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