Cystobacter fuscus: CYFUS_004035
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Entry
CYFUS_004035 CDS
T05065
Name
(GenBank) Thrombospondin type 3 repeat OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
cfus
Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfus02000
]
CYFUS_004035
Transporters [BR:
cfus02000
]
Other transporters
Pores ion channels [TC:
1
]
CYFUS_004035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_3
OmpA
DUF748
Phenol_MetA_deg
Motif
Other DBs
NCBI-ProteinID:
ATB38600
UniProt:
A0A250J4X5
LinkDB
All DBs
Position
complement(4971498..4973339)
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AA seq
613 aa
AA seq
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MSHTHSAGPRRLSLFATLMLAATSLTGSDALAQPTGLGRFELERLVLNPNGQGSLTVGTG
ELLPQGGYRLSLLGHYENDPLVMYRDGNRLGSVVRDRVTAHLLAAWAPLRWLELGAQLPV
VAWQNGDDLSGQGVGAPARTGLGTPMVYARLGLLAQQREAPLDLALELGVGLPVGSVDTL
SRDGSVRLEPKLMLGRRFGGLRAGVEGSVLVRPSVVLGEGGELEDEVGNEVRLGAVVATT
GPGLRGELNLRGVLPLGGQPRSMELLAGLRLPLSERVEAYALGGPGFGDTLGTPTFRALL
GVALVDGKPRDADKDGIEDGQDKCPNEAGPAERQGCPVRDADRDGIEDGQDQCPNEAGPA
ERQGCPVRDADGDGIEDGQDQCPNEAGPAERQGCPVRDADGDGTEDGQDQCPNEAGPAER
QGCPVRDSDGDGLVDERDACPSQPGLKELRGCPAKDSDNDGVADHLDNCPTEAGVADNQG
CPAKQKQMVAIQKGKLEIKEQVFFATGKAVIQPRSFKMLDQVAKVLREHPEVEQMVIEGH
TDNRGKAEANRKLSLARAESVKKFLVGKGVEESRLEARGFGPDQPIASNDTEKGRATNRR
VEFIITTAERELK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagccacacccactcggcgggccccaggcgcctgtcgcttttcgccacactgatgctc
gccgccacatcgctcaccggttcggacgcgctcgcccagcccacgggcctgggccgcttc
gagctggagcgcctcgtgctcaatcccaacggccagggctcgctcaccgtgggaacgggc
gagctgctcccccagggaggctaccggctgtcgctgctggggcactacgagaacgatccc
ctggtgatgtaccgggacggcaaccggctgggctcggtggtgcgcgaccgcgtcaccgcg
cacctgctggcggcctgggctcccttgcggtggctggagctgggcgcgcagctgcccgtg
gtggcgtggcagaacggggatgacctctccgggcagggcgtgggcgcaccggcgcgcacg
ggcctgggcacgcccatggtgtacgcgcggctgggactgctcgcgcagcagcgcgaggcg
ccattggatctcgcgctcgagctgggcgtgggcctgcccgtgggcagcgtggacacgctg
tcgcgggacgggagcgtgcgcctggagcccaagctgatgctgggccggcgcttcggcgga
ctgcgcgcgggcgtggagggcagcgtgctggtgcggccctccgtcgtgttgggcgagggc
ggcgagctggaagacgaggtgggcaacgaggtgcgcctgggcgcggtggtggccacgacg
gggccggggctgcgcggagaactcaacctgcgcggagtcctcccgctcggcggccagccg
cggtccatggagctgctggccggtctgcggctgcccctgagcgagcgcgtcgaggcctat
gccctgggcggtcccggctttggtgacaccctcggcacgcccaccttccgcgcgctgctg
ggcgtggcgctggtcgacgggaagccgcgcgacgccgacaaggacggcatcgaggatggc
caggacaagtgccccaacgaggcgggcccggccgagcgtcagggctgcccggtgcgcgac
gccgaccgggacggcatcgaggacggccaggaccagtgccccaacgaggcgggtccggcc
gagcgccagggctgcccggtgcgcgacgccgacggggacggcatcgaggacggccaggac
cagtgccccaacgaggcgggtccggccgagcgccagggctgcccggtgcgcgacgccgac
ggggatggtaccgaggacggccaggaccagtgccccaacgaggcgggtccggccgagcgt
cagggctgcccggtgcgcgactccgatggggatggtctggtggacgagcgggatgcctgc
ccctcgcagccaggactgaaggagctgcgcggctgcccggcgaaggacagcgacaacgac
ggcgtggcggaccacctggacaactgccccaccgaggcgggtgtggccgacaaccagggc
tgcccggcgaagcagaagcagatggtggccatccagaagggcaagctggaaatcaaggag
caggtgttcttcgccacgggcaaggcggtcatccagccgcgctccttcaagatgctggat
caggtggccaaggtgctgcgtgagcaccccgaggtggagcagatggtcatcgagggccac
accgacaaccggggcaaggcggaggccaaccgcaagctgtccctggctcgagccgagtcg
gtgaagaagttcctggtgggcaagggcgtggaggagtcgcgcctggaggccaggggtttc
ggccccgatcagcccatcgcgtccaacgacacggagaagggccgcgcgaccaaccggcgc
gtggagttcatcatcaccaccgccgagcgcgagctgaagtag
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