Cystobacter fuscus: CYFUS_004213
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Entry
CYFUS_004213 CDS
T05065
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYFUS_004213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfus03021
]
CYFUS_004213
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_004213
Enzymes [BR:
cfus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYFUS_004213
Transcription machinery [BR:
cfus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYFUS_004213
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYFUS_004213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
IL11
Motif
Other DBs
NCBI-ProteinID:
ATB38778
UniProt:
A0A250J5G5
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All DBs
Position
5171597..5172640
Genome browser
AA seq
347 aa
AA seq
DB search
MADTFIAKNWRDLIKPRRLEVDQDSLTPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAVTTVKIENVDHEFQTIPEVAEDVTDVVLNLKEVLLRMHTNEQKTLRIEAEGPKEVKAG
DIIADQDVEILNPGHHICTISEGGKVRMELTCRRGRGYVPASVNKVAGSPIGTIPIDSLF
SPIRKVNYQVTNARVGQVTDYDKLTLEVWTDGSVTPQDAVAYAAKIVKEQLTVFVNFDET
EEPVAVEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKTIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKTPPAAPPPSPAATAPKA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggctgatactttcatcgcgaagaactggcgggacctcatcaagccgcgtcggctcgag
gtcgatcaggactcgctcacccccacctacggcaagttcgtcgccgagccgctggagcgg
ggttttggcaccacgctgggcaactccctgcgccgcgtgctgctgtcgagcctccagggc
gcggccgtcaccacggtgaagatcgagaacgtggaccacgagttccagaccatccccgag
gtggccgaggacgtcacggacgtcgtgttgaatctgaaggaggtcctcctccggatgcac
acgaacgagcagaagacgctgcgcatcgaggcggagggtcccaaggaggtcaaggccggt
gacatcatcgccgaccaggacgtggagatcctcaacccgggtcaccacatctgcaccatc
tccgagggcggcaaggtccgcatggagctcacgtgccgccgcggccgtggctacgtgccc
gcctccgtgaacaaggtggctggctcgcccatcggcaccatccccatcgactcgctcttc
tcgcccatccgcaaggtgaactaccaggtcaccaacgcgcgcgtcggtcaggtcaccgac
tacgacaagctcaccctcgaggtgtggacggacggctccgtcacgccccaggacgccgtc
gcctacgcggcgaagatcgtcaaggagcagctcacggtgttcgtcaacttcgacgagacc
gaggagcccgtggccgtcgaggcccccaaggaggaggccaagctcaacgagaacctcttc
cgctccgtggacgagctggagctctcggtgcgctcggccaactgcctgcagcaggccaac
atcaagacgatcggcgacctggtgcagcgcaccgaggccgagatgctcaagaccaagaac
ttcggccgcaagtccttgaaggaaatcaaggagatcctcgcggagatgggcctgtcgctc
ggcatgaagctggagaactggccgccgaagaccccgcccgccgcgcctcctccgagcccc
gcggccaccgcgccgaaggcctag
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