Cystobacter fuscus: CYFUS_004963
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Entry
CYFUS_004963 CDS
T05065
Name
(GenBank) WD-40 repeat protein
KO
K20276
large repetitive protein
Organism
cfus
Cystobacter fuscus
Pathway
cfus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYFUS_004963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_1
Kelch_6
Kelch_3
Kelch_2
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
HYR
OmpA
Glyoxal_oxid_N
Big_9
NANM
TSP_3
Cadherin_5
Cadherin_4
DUF748
Big_13
Big_3_3
Motif
Other DBs
NCBI-ProteinID:
ATB39519
UniProt:
A0A250J6F9
LinkDB
All DBs
Position
complement(6181994..6186973)
Genome browser
AA seq
1659 aa
AA seq
DB search
MLLPRDVWSRVLVLVGSALLVSCAKEAPSPANDDAVASITAPLAAAPGWSSAAPMARPSS
QHAAVLLGSGKLLIINGTDSSGPISSAELYDPATDTWTSAGAPGFQGNITQAVLLPNGKV
LVLTESSRTGHLHDPATGTWTDTGDLSDDRALPSVTLLESGRVLVAGGSNRAGVQLTSAD
LYDPVTNTFTPTGAMTLSRGSHSATRLQDGRVLAVSGYGQGGEVPGADLYDPATGTWSAV
APPLVPRYFFTSTLLPDGRVLITGGSDASGIVLSDAELYDPGSNTWTATSSMALTRSRHA
ATLLPDGKVLVTGAGIGQTPLSELYDPATGQWSPGDTMADGRAGHTATLLPSGKVLVVGG
YDAAGAATLASTELYDPGVNRWTPAGALGGARVDPLVALLPSGRVLVAGGRNSGGASLAS
AQLYDRAANTWTFAASLSLPRERATATLLRSGSVLVVGGLSGGSSVGSTERYDAATNAWS
PTAPLASARHFHTATLLTDGRVLVVGGQRDATVLGTAELYDPTADAWTPVASLTTVRSAH
AAALLPDGRVLVAGGRNGAGAALATAEVYDPASNTWTPTAGLAQGREGLTLTLLPSGQVL
AAGGLTGATGLSSTELYDASTNTWVAGPALSQAHGYHTATLAPSGKVLVAGGLSAPGTPS
TSADVYDPAHHDWTSVSAPASSGGLVAAALPSGEVLLAGGSAATGAELYEDTGAQPAWRP
VVSQPDVLFPTCPSVLQGQGFRGISGASSGNFGASPTDFPLVRLRGAEGGRLWTLPATDM
SATSATVTVPADLPPGTYALSVFANAIPGGRMVTVLPNTAPTAQPQTVSTTRGTPVAITL
VGTDPDVGQTLSWTLVTPPQHGTLSGTPPSLTYTPEPGYEGPDSFSFRVRDCGQDSNVAT
VDIDVTNPPPTITCPADTASEAVGPDGAPGNWPPATATDEGADPTITYSPPRESTFPLGS
TTVTATATDDSGGTASCSFQFTVQDTTPPSVTCPEDIQVRSDDASGTSVTFTLPAATDAV
SSTTVTSSPASGSVFRHGATRVTVTATDAAGNSAQCSFQVTVQATVVSIAGGGCQSTGSG
TASSLALLLLGLASRSRRRRSTPMSFPSRPRARGRVLVALLAALLAPAVHAQSAGPILPM
DLERLRFNPAATDSLLVDTGHVLPEGSYRLLLMAGYERGILLLRGSDGVERPIIDYRVAG
WLAGAWSPIERLELSARLPIIIAQGGSGAESLVGVTAPTSFGLGTPELGARYALLRREDG
APVFLGLGLDIGLPGGTASAFGRQNGWAGFQFAPRVAVGREVGPLSLGASAGVRIRSTEV
EPGRNFGSELEQGLVVATRGEGLRAEIALEAAESLVAPDVALELLGGLRLPVGHGFEAFA
LAGHGFTDIPGTPSFRVAAGIAWAPPYVPPAREDVCKEGRTHTPEQCPELDDDGDSVANA
QDRCPLEAGAVDNGGCPDGDSDGDGVVDRQDRCPSEPGLPRYQGCPAPDADGDGIADDED
ACPHEAGVETNRGCPVQEEKPTEAPPPEPPPERAPPREEPPPPEQAAPPTDHHVLFPVGE
SSLQEEEKRQLDAIADYLKAHPELSVRVEGHTDATGPEELNVTLSQQRADMVREYLIQRG
IAGSRLTAKGYGSSRPVAENSTPEGQRANRRVEFITEKR
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacctcgcgatgtctggagcagggtgctggtgttggtggggagtgcgctcctg
gtgtcctgcgcgaaggaggccccgtcgcccgccaacgacgacgccgtggcctccatcacc
gcgcccctggccgcggctcccggctggtcctccgccgcgcccatggccaggccaagctcg
cagcatgccgccgtcctgctcggctccggcaagctcctgatcatcaatggcaccgacagc
tcgggccccatctccagcgcggagctctacgacccggccaccgatacgtggacctccgcg
ggagcgcccggcttccagggcaacatcacgcaggccgtgctgctccccaatggcaaggtg
ctcgtgctgacggagtcctcccggacgggtcacctccatgaccccgccacgggcacgtgg
acggacacgggcgacctgtcggatgaccgcgcgctgcccagcgtcaccctcctggagtcg
ggtcgggtgctggtcgccggtggctcgaatcgcgcgggagtccaactcacctccgcagac
ctgtacgatcccgtcaccaacacgttcactcccaccggcgccatgacgctgagccggggg
tcgcactccgccacgcgactccaggacggcagggttctcgccgtgagtggctacggccag
ggcggtgaggtccccggcgcggacctctacgatcccgcgaccggcacctggtccgccgtc
gcgccgcccctcgtgccgcggtacttcttcaccagcacgttgctgcccgatggccgcgtg
ctgatcaccggtggctcggacgccagcggaatcgtcctgtccgacgcggagctgtacgat
ccggggagcaacacgtggaccgccacgagcagcatggccctcacgcgctcgcgccatgcg
gccacgctgctgcccgatggcaaggtgctggtgaccggcgccggcatcggccagactccg
ctctcggaactctatgatcccgccaccggccagtggtcccccggggacaccatggcggac
gggcgggcgggccacaccgcgacgctgctgccgtccggcaaggtgctggtcgtgggtggc
tacgacgcggcgggcgctgccaccctcgcgagcacggagctgtatgacccgggcgtcaac
cggtggaccccggccggcgcgctgggtggagcccgggtggatccgctggtggcgctgctg
ccctccggccgcgtcctcgtcgcgggaggccgcaacagcggaggcgcgtcgctggcctcg
gcgcagctctatgatcgggcggccaacacctggacgttcgcggcgtccctctcccttccg
cgtgagcgcgccacggcgacgctgctgcgctcgggctcggtgctcgtggtcggtggcctg
agcgggggcagctcggtgggctcgaccgagcgctacgatgcggccaccaatgcctggagc
ccgaccgcgccgctcgccagtgccaggcacttccacaccgccacgctcctcacggacggc
cgggtgctcgtcgtgggcgggcagcgcgacgccacggtgctcgggacggcggagctgtat
gaccccaccgccgacgcgtggaccccggtggcctccctgaccacggtccggtccgcgcat
gccgccgcgctgcttcccgatggccgggtgctcgtcgccgggggacgcaacggcgcgggc
gcggcgctggccaccgcggaggtgtacgacccggccagcaatacctggacccccaccgcg
gggctggcccagggccgcgaaggcctcacgctgacgctgctgccctccggccaggtgctg
gcggcgggagggctcacgggcgccacgggcctctcgtccacggagctgtatgacgccagt
accaacacgtgggtcgccgggcccgcgctctcccaggcgcacgggtaccacaccgcgaca
ctcgcgccttcgggcaaggtcctggtcgcgggcggcctgagcgcgccgggcacgccctcc
acctcggcggacgtctatgaccccgcccatcatgactggacctccgtcagtgctccggct
tcaagcggagggctcgtcgcggccgccctgccctcgggcgaggtgctcctcgcgggcggc
tcggccgcgacgggggccgagctgtacgaggacaccggcgcacagcccgcgtggcgcccg
gtggtgagtcagccggacgtcctcttccccacctgtccgagcgtcctccagggccagggc
ttccggggcatctcgggcgcgagcagcggcaacttcggtgcctccccgacggacttcccc
ctggtgcgcctgcggggcgccgagggaggacgactctggacgcttcccgcgacggacatg
tccgccacgagcgcgacggtgaccgtcccggccgacttgccgccggggacgtacgccctg
tccgtcttcgccaatgccattccgggtgggcgcatggtgacggtgctccccaataccgcg
cccacggcgcagccccagacggtctccacgacccgcggcacgcccgtggccatcaccctc
gtcgggaccgacccggatgtggggcagacgttgagctggaccctcgtcacgcccccgcag
cacgggacgctgagtggcacgccgccgtccctcacctacacgcccgaaccgggctacgag
ggccccgacagcttctccttccgggttcgggactgcggccaggacagcaacgtcgccacc
gtggacatcgacgtcacgaatccgcctcccaccatcacctgccccgcggacaccgcgagc
gaagcggtgggccccgacggtgccccgggcaactggccgcccgccacggccaccgacgag
ggagccgaccccaccatcacctattcgccgcccagggagagcaccttccccctcgggagc
acgaccgtcacggccacggcgacggacgattcgggcggcacggcgtcgtgctcgttccag
ttcaccgtccaggacacgacgcctccgtccgtgacgtgcccggaggacatccaggtgcgc
tcggatgatgcctcgggcacctccgtgacgttcacgcttcccgcggccacggacgccgtc
tcctcgacgacggtgacctcctcgccggcctcgggcagtgtcttcagacatggcgccacg
cgcgtcaccgtcaccgccacggacgcggccggcaactccgcgcagtgctccttccaggtc
acggtccaggcgacggtggtgtccatcgccggaggcggctgccagagcacgggcagtggg
acggcctcgtcgctggcgctcctcctgttggggctcgcctcgaggagccgccgtcgccgc
tccacgccaatgagctttccctcgcgtccacgggctcggggccgggtgctggtcgcgctc
ctggccgccctccttgcccccgccgtccatgcccagagcgccgggcccatcctcccgatg
gacctggagcgcctgcgcttcaatcccgcggcgacggactcgctgctggtggacaccggc
cacgtgctccccgaggggagctatcgactgctcctcatggccggctacgagcgcggcatc
ctgctgctcaggggcagtgatggcgtggagcgccccatcatcgactaccgcgtcgcgggc
tggctcgcgggggcctggtctcccatcgagcgcctggagctgtccgcgcggctgcccatc
atcatcgcccagggaggctcgggcgcggagtcgctggtcggagtgacggcgccgacctcc
ttcggactgggaacgccggagctgggcgcgcgctatgcgctgcttcgccgcgaggacggg
gcgccggtgttcctcggcctgggactggacatcggactgcccggcggaacggcgagtgcg
ttcggtcggcagaatggctgggcggggttccagttcgcgccccgggtggccgtgggacgc
gaggtgggtccgctgtcgctgggcgccagcgcgggcgtgcggatccgctccacggaggtc
gagcccggccggaacttcggaagtgaactcgagcaggggctcgtggtggccacgcgcggc
gaaggcctgcgcgccgagatcgcgctggaggcggccgagtcgctcgtggcgccggatgtg
gcgctggagttgctcggtggcttgaggctgccggtgggccatggcttcgaggcgttcgcg
ctggcggggcatggcttcacggacattccgggcacgccctcgttccgcgtggccgcggga
atcgcctgggctcccccctacgtgcctcctgcccgtgaagacgtctgcaaggagggccgc
acccacacgccagagcagtgcccggagctggatgacgacggtgactcggtggccaacgcg
caagaccgctgcccgctcgaggccggcgcggtggacaacggcggctgcccggatggcgac
tcggacggggacggcgtcgtggatcgccaggaccggtgcccctccgagccgggactcccg
cgctaccagggctgccccgcccccgacgcggacggtgatggcatcgcggacgacgaggat
gcctgcccccacgaggctggcgtcgagacgaatcgtggctgcccggtccaggaggagaag
cccaccgaggcgccgcctcccgagcccccgcccgagcgggcaccgccgcgcgaggagccg
cctccgcccgagcaggccgcaccgcccacggaccaccatgtcctgttcccggtgggagag
tcgtccctccaggaggaagagaagcggcagttggatgccatcgcggactacctcaaggcc
cacccggaactctcggttcgcgtcgaggggcacacggacgccaccggccccgaggagctc
aatgtcacgctgagtcagcagcgcgcggacatggtgcgcgagtacctcatccagcgcggc
atcgcgggctcccgcctgaccgccaaggggtacgggtccagccgccccgtggcggagaac
agcacacccgaggggcagcgcgcgaaccgccgcgtcgagttcatcacggagaagcgctga
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