Cystobacter fuscus: CYFUS_005378
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Entry
CYFUS_005378 CDS
T05065
Name
(GenBank) tRNA pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cfus
Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfus03016
]
CYFUS_005378
Enzymes [BR:
cfus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CYFUS_005378
Transfer RNA biogenesis [BR:
cfus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CYFUS_005378
Prokaryotic type
CYFUS_005378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATB39930
UniProt:
A0A250J8Q5
LinkDB
All DBs
Position
6679840..6681444
Genome browser
AA seq
534 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVASGRYRVYLMDKQKLSTFDAANRLREAFGLKPGSISYCG
LKDKQGRTEQLIAVDGADVDMQEPDLRLKYLGRSDKALSAANITSNRFAVTVRMLTQESI
GPLNVAAAEINRLGVVNYFDSQRFGSLKHGQGFIAKDLLRGDFEAALHNYLARPSELDRS
EDAKVKAFWRDNWGKWDARVPFEGSRKYHRILKSLREHPGDWVRAFLQIEADYRAMLLFT
YQSYLWNEGVRRYLQVLLPRESLFPMKYQAGTLLFHRDADPETLNTLRASTFPLLAPDTR
IEDPKVKQAVDWVMGREKLSSFEDLRVREAPRMLYFKHEERPTVVVPHKLVIGRVQNDDL
NRGFLKVNIAFTLPPGAYATLVIKRLFHFEYEEESAQKIREGWYTPPERDEEEQPAPRGP
RRASSGEARPPRTASRGAAPAGRGAAAESRAHRPSPRDSALAKLAATPTGPAARRSPDSA
PTGNRRAPAREAAAPPPAPTPPAGFRERQRLKKTAKEQARQEQAAKRPESRKKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaagcagaaacccgaggatttctccgtcaaggagtcctaccgcttcgacgaa
gtggccagcggtcgctaccgcgtctacctcatggacaagcagaagctgtccaccttcgac
gcggccaaccgcctgcgcgaggccttcggcctcaagcccggctccatctcctactgcggc
ctgaaggacaagcagggccgcaccgagcagctcatcgccgtggacggcgccgacgtggac
atgcaggagcccgacctgcgcctgaagtacctggggcgctcggacaaggccctgtccgcg
gccaacatcacctccaaccgcttcgccgtcaccgtgcgcatgttgacgcaggagtccatc
ggaccgctcaacgtggccgccgcggagatcaaccgcctgggcgtggtgaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggatctgctgcgc
ggcgacttcgaggccgcgctgcacaactacctggcgcgcccctcggagctggatcgctcg
gaggacgccaaggtgaaggccttctggcgcgacaactggggcaagtgggacgcgcgcgtg
cccttcgagggcagccgcaagtaccaccgcatcctcaagtccctgcgcgagcaccccggc
gactgggtgcgcgccttcctgcagatcgaggcggactaccgcgcgatgctgctcttcacc
taccagagctacctgtggaacgagggcgtgcggcgctacctccaggtgctgctgccgcgc
gagagcctcttcccgatgaagtaccaggcgggcaccctgctcttccaccgcgacgcggac
cccgagacgctcaacaccctgcgcgcctccaccttcccgctgctcgccccggacacccgc
atcgaggatccgaaggtgaagcaggccgtggactgggtgatgggccgcgagaagctctcc
tccttcgaggatctgcgcgtgcgcgaggccccgcggatgctctacttcaagcacgaggag
cgccccaccgtcgtcgtgccgcacaagctcgtcatcggccgcgtccagaacgacgacctc
aaccggggcttcctcaaggtcaacatcgccttcaccctgccccccggcgcctacgccacg
ctcgtcatcaagcggctcttccacttcgagtacgaggaggagagcgcccagaagatccgc
gagggctggtacacgccgccagagcgggacgaggaggagcagccagcaccccgcggaccg
cgccgggcctcctccggcgaagcccgcccccctcgtaccgcgtcccggggcgccgcgccc
gccggccggggagccgccgccgaaagccgggcccaccgcccctcgccgcgggactccgcg
ctcgccaagctcgccgccacgcccacgggcccggccgcccggcgctcgcccgattccgcg
cccaccggcaaccggcgcgccccggcccgggaagccgccgcgcctccgcccgcccccacg
ccccccgctggttttcgcgagcgccagcggttgaagaagaccgccaaggagcaggcccgt
caggagcaggccgccaaacgcccggaatcccggaagaaaaaatga
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