Cystobacter fuscus: CYFUS_005696
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Entry
CYFUS_005696 CDS
T05065
Name
(GenBank) uracil-DNA glycosylase family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYFUS_005696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_005696
Enzymes [BR:
cfus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CYFUS_005696
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYFUS_005696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
UBA_2
Motif
Other DBs
NCBI-ProteinID:
ATB40248
UniProt:
A0A250J9L6
LinkDB
All DBs
Position
complement(7079756..7080718)
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AA seq
320 aa
AA seq
DB search
MSEAPHPSQALSEVLEDLRRHLLWQQEEGGRFLQVDARVAAEARAAGLPRPAALARPPVV
SKPAPAPQAPPPAAPPPPPRAAVPSPPPRAAAPQAERPPAPRTQTPAAPALFEVPAQARP
YAGSLPGVVEGERPRLDDIRRELGDCRRCKLCTGRKNIVFGSGNPHAELVFVGEGPGETE
DQQGVPFVGAAGQLLTKMIEAMGYRRDDIYICNVVKCRPPGNRNPEPDEVAACEPFLRAQ
LKAIQPKAIVALGKFAAQTLLRDSTPITRLRGTWRQYEGIQLMPTFHPAYLLRQPAEKRK
AWEDLQQVMKFFGKTSGQRG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagccccccatccctcgcaggcgttgagcgaagtcctcgaggatctgcgccgt
cacctcctctggcagcaagaggagggtggccggttcctccaggtggacgcacgtgtggcc
gcggaagcccgtgccgcgggtctcccccggccagcggccctggcgcgccccccggtggtc
agcaagcccgcccccgcgccccaggcgcctcccccggcggcccctccaccgcctcctcgc
gcggccgtcccttcaccgccaccccgggcggcggcaccccaggccgagcgccccccggct
ccgcggacccagactcccgcggcgcccgcgctgttcgaggtgcccgcgcaggcgcggccc
tacgcgggctcgctgccgggcgtggtggagggtgagcggccccgcctggatgacatccgg
cgcgaactgggggactgccgccggtgcaagctgtgcacgggccgcaagaacatcgtcttc
ggttcgggcaatccccacgccgaactggtgttcgtgggcgagggtcccggcgagaccgag
gatcagcagggcgtgccgttcgtgggcgccgcgggccagttgctcacgaagatgatcgag
gcgatgggctaccgccgcgacgacatctacatctgcaacgtggtgaagtgccggccgccg
ggcaaccgcaaccccgagccggacgaggtggcggcgtgcgagccgttcctccgcgcgcag
ctcaaggccatccagcccaaggccatcgtggcgctgggcaagttcgcggcgcagacgctg
ctgcgcgacagcacgcccatcacccggctgcgcggcacctggcgtcaatacgagggcatc
cagctcatgcccaccttccacccggcctacctgctgcgccaaccggcggagaagcgcaag
gcctgggaggatctccaacaggtcatgaagttcttcggcaagacatccgggcagcgcggc
tga
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