Cystobacter fuscus: CYFUS_006061
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Entry
CYFUS_006061 CDS
T05065
Name
(GenBank) Oligopeptide transport ATP-binding protein OppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
cfus
Cystobacter fuscus
Pathway
cfus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYFUS_006061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfus02000
]
CYFUS_006061
Transporters [BR:
cfus02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CYFUS_006061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ATB40610
UniProt:
A0A250JAK5
LinkDB
All DBs
Position
complement(7597727..7598779)
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AA seq
350 aa
AA seq
DB search
MSQPGARAMTEPLLQVRDVKTHFPVRGGPWGRARGIVKAVDGVSFDVRRGETLGLVGESG
CGKSTLGRTLLRLVGPTAGSIRFEGRELTGLSQRELRPLRRRMQLVFQDPYASLNPRMSV
RELLGEPFAIHGLERGAAREAKVAGLLDMMGLPREALERYPHEFSGGQRQRIGIARAIAL
RPDLVVADEPISALDVSIQAQIVNLLVELQRELGLTYVFIAHDLKIVEYVSTRVAVMYLG
RIVELADAADLYRTPRHPYTQALLSAVPVPDPEHRRERILLQGDVPSPLAPPPGCAFHPR
CPFAMDRCRRETPPLYSLERGHTAACFLVENDARERPASAPGASPSHEGG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacccggtgcccgcgccatgaccgagcccctcctccaggtacgggacgtgaag
acccacttcccggtgcggggcgggccgtgggggcgcgcgcgtggcatcgtgaaggcggtg
gacggcgtgagcttcgacgtgcggcgcggcgagacgctcgggctggtgggcgagagcggt
tgcggcaagagcaccctcgggcgcaccctcttgcggctcgtggggcccacggcgggctcc
atccgcttcgagggtcgggagctgacgggcctgtcccagcgcgagctgcgccccttgcgg
cggcgcatgcagctcgtcttccaggatccctatgcctcgctcaacccgcgcatgtccgtg
cgggagttgctcggcgagcccttcgccatccacgggctcgagcggggcgccgcgcgcgag
gcgaaggtggcggggctcctggacatgatgggcctgccgcgcgaggccctggagcgctac
ccgcacgagttctcgggaggccagcgccagcgcatcggcatcgcccgggccatcgccctg
cggccggacctggtcgtcgccgacgagcccatcagcgcgctcgacgtctccatccaggcg
cagatcgtcaacctgctcgtggagctccagcgcgagctggggctcacctacgtcttcatc
gcgcacgacctgaagatcgtcgagtacgtctccacgcgcgtggcggtgatgtacctgggc
cgcatcgtggagctggcggacgcggcggacctctaccgcacgccccgccacccctacacc
caggccctgctgtcggcggtgccggtgccggatcccgagcatcgtcgggagcgcatcctg
ctccagggcgatgtcccgtctccgctcgcgccccctcccgggtgcgccttccatccgcgc
tgtcccttcgccatggatcgctgccggcgggaaacgccgcccctctactcgctggagcgg
gggcataccgccgcgtgcttcctggtggagaatgacgcgcgcgagcgtccggcctctgcc
ccgggcgcttcccccagccacgagggagggtag
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