Cystobacter fuscus: CYFUS_006286
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Entry
CYFUS_006286 CDS
T05065
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYFUS_006286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfus03021
]
CYFUS_006286
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_006286
Enzymes [BR:
cfus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYFUS_006286
Transcription machinery [BR:
cfus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYFUS_006286
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYFUS_006286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ATB40830
UniProt:
A0A250JB71
LinkDB
All DBs
Position
complement(7891591..7895808)
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDIFNFFEKPKDPLSFNAIRIALASPDKIRQWSHGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHITLATPVAHIWFLKSL
PSRIGNLLDITLKELEKVLYCESYIIIDPKATPLQKGELVSEEKLHRLYEEHGEDSFSAG
MGGEAVREMLKALDVVRLSEDLRRDMRETNSEAKKKKYAKRLKVAEAFRMSGNKPEWMML
DVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDIIIRNEKRML
QEAVDALFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELRLHQCGLPKIMALELFKPFIYNKLEEKGYVTTIKSAKKMVEKERPEVWDILEDVIREH
PVLLNRAPTLHRLGMQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME
ARVLMMSTNNILSPANGKPIIVPTQDMVLGIYYMTRAREFAHGEGRVFASPDEVRAAYDH
GEVHLQAKIVCRILGKRKETTVGRVLLWDIVPRKVGFDAINKVLDKKSLGGLIDLCYRLT
GEKETVLLADRIRSLGYTNATRAGISIALKDMIIPAKKQTFLEYAGKEVAEIENQYLEGL
ITDGERYNKVIDIWAEITEKVAAEMMQQISQEEAVGDKDGKRETRKQPSFNPIYIMADSG
ARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLSVLQYFISTHGARKGLADTALK
TANSGYLTRRLVDVAQDAIINEYDCGTMDGLFIGALVEGGEIIEALGERILGRVALDDIL
DPVTNDVLVRANEEIDEDRVKKIENSGLDRVKIRSVLTCQAKRGICVECYGRDLARGRKV
AVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRRAEQSSLENRNPGTVKFSGLNTVQRK
DGSLVAMNRNGELVIVDESGRERERYQVIYGARILVKEGQKLETSTLLAEWDPFAIPLLT
EVGGIVRFEDIIEGVTMNESLDEVTGLTRKTVIESKDPDARPHITLRDENGNLKDLVSSK
GQASYFLPQGSIITVNDGDEIHAGEVIAKVPRETTKTKDITGGLPRVAELFEARKPKDAA
SIAEIDGVVSFGKDTKGKRKLIITPEVGGELRTDLAKEYLISKGKNISVHAGDRVKAGEA
LMDGSANPHDILKVLGEKALAGYLVDEVQEVYRLQGVKINDKHIEVIVRQMLRRVRVTDV
GDTSFLVDEQVEKWVFEEENEKVMANGQRPGVGEPLLLGITKASLSTESFISASSFQETT
KVLTEAAINGKVDYLRGLKENVIMGRLIPAGTGLPNYKHLDIEVESPADEISEMEAALAA
THGDDLVPPLSSGSRSEGSQSSGAA
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacattttcaacttcttcgagaagccgaaggatccgctctcgttcaacgccatc
cgcatcgcgctggcgtcgccggacaagatccgccagtggtcgcatggcgaggtgaagaag
cccgagacgatcaactaccgcaccttcaagccggagcgggacgggttgttctgcgcccgc
atcttcggcccggtgaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac
cgcggcgtcgtgtgcgagaagtgcggcgtggaggtcatccagtccaaggtgcgccgtgag
cgcctgggccacatcacgctcgccacgcccgtggcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcaacctgctcgacatcacgctcaaggagctcgagaaggtcctgtac
tgcgagagctacatcatcatcgatcccaaggcgacgcccctgcagaagggcgagctcgtc
agcgaggagaagctccaccggctttacgaagagcacggcgaggactccttcagcgcgggc
atgggcggtgaggccgtgcgcgagatgctcaaggccctggacgtggtgcgcctgtccgag
gacctgcgccgcgacatgcgcgagaccaactccgaggccaagaagaagaagtacgccaag
cgcctcaaggtggccgaggccttccgcatgtcgggcaacaagcccgagtggatgatgctc
gacgtcatccccgtcatcccgcccgatctgcgccccctggtgccgctcgatggcggccgc
ttcgccacgtccgacctcaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctc
aagcggctgcaggagctcaacgccccggacatcatcatccgcaacgagaagcggatgctc
caggaggccgtggacgccctgttcgacaacggccgccgcggcaagacgatcaccggcccg
aacaagcggccgctcaagtcgctctccgacatgctcaagggcaagcagggccggttccgt
cagaacctgctcggcaagcgcgtggactactcgggccgctccgtcatcgtggtgggcccc
gagctgcgcctgcaccagtgcggtctgcccaagatcatggcgctcgagctcttcaagccg
ttcatctacaacaagctcgaagagaagggctacgtcaccaccatcaagagcgccaagaag
atggtggagaaggagcgtcccgaggtctgggacatcctcgaggacgtgatccgcgagcac
ccggtgctcctcaaccgcgcccccacgctgcaccgtctgggcatgcaggccttcgagccc
gtcctcatcgagggcaaggccatccagctgcacccgctcgtgtgcgccgcgttcaacgcg
gacttcgacggcgaccagatggccgtccacgtgccgctgtccatcgaggcccagatggag
gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacggcaagcccatc
atcgtccccacgcaggacatggtgctcggcatctactacatgacgcgcgcgcgtgagttc
gcccacggcgagggtcgcgtgttcgcctcgcccgacgaggtgcgtgccgcgtacgaccac
ggcgaggtgcacctgcaggcgaagatcgtctgtcgcatcctcggcaagcgcaaggagacc
accgtcggccgcgtcctgctctgggacatcgtgccgcgcaaggtgggcttcgacgccatc
aacaaggtgctcgacaagaagtcgctcggcggcctcatcgacctctgctaccgcctcacc
ggcgagaaggagacggtgctcctggccgatcgcatccggagcctcgggtataccaacgcc
acgcgcgccggtatctccatcgcgctcaaggacatgatcatccccgccaagaagcagacc
ttcctggagtacgcgggcaaggaagtggcggagatcgagaaccagtacctcgagggcctc
atcaccgacggcgagcgctacaacaaggtcatcgatatctgggcggagatcaccgagaag
gtggccgccgagatgatgcagcagatctcccaggaagaggccgtgggcgacaaggacggc
aagcgcgagacgcgcaagcagccctccttcaaccccatctacatcatggccgactcgggt
gcccgcggcagcgcgcagcagatccgccagctcgccggtatgcgcggcctcatggccaag
ccctccggtgaaatcatcgagacgcccatcacggccaacttccgtgaaggcctctccgtg
ctccagtacttcatctccacccacggcgcccgcaagggtctggcggacacggccctcaag
acggccaactccggctacctcacccgccgtctcgtcgacgtggcccaggacgccatcatc
aacgagtacgactgcggcaccatggacggtctgttcatcggcgccctcgtcgagggcggt
gaaatcatcgaggcgctcggcgagcgcatcctcggccgcgtggccctggacgacatcctc
gatccggtgaccaacgacgtgctcgtgcgcgccaacgaggagatcgacgaggaccgcgtc
aagaagatcgagaacagcgggttggatcgcgtgaagatccgctcggtgctcacgtgccag
gccaagcgcggcatctgcgtggagtgctacggccgtgacctggctcgcggccgcaaggtg
gccgtgggcgaggcggtgggcgtcatcgcggcgcagtccatcggtgagccgggtacccag
ctcacgatgcgcaccttccacatcggtggtgcggcgcagcggcgcgccgagcagtccagc
ctcgagaaccgcaaccccggtacggtgaagttctccggcctcaacacggtgcagaggaag
gacggcagcctcgtcgcgatgaaccgcaacggcgagctcgtcatcgtcgacgagagcggc
cgcgagcgcgagcgctaccaggtcatctacggcgcgcgcatcctcgtgaaggaaggccag
aagctcgagaccagcacgctcctggccgagtgggatccgttcgccatcccgctgctcacc
gaggtgggcggtatcgtgcgcttcgaggacatcatcgaaggcgtcacgatgaacgagtcg
ctcgacgaggtgacgggcctcacccggaagacggtcatcgagtccaaggaccccgacgcc
cgtccgcacatcacgctgcgcgacgagaacggcaacctcaaggatctggtgtcctccaag
ggccaggcgagctacttcctgccccagggctccatcatcaccgtcaacgacggcgacgag
atccacgccggtgaggtcatcgccaaggtgcctcgcgagaccaccaagacgaaggacatc
acgggtggtctgccgcgcgtcgccgagctgttcgaggcgcgcaagcccaaggacgccgcg
tccatcgccgagatcgacggcgtggtctccttcggcaaggacaccaagggcaagcgcaag
ctcatcatcacccccgaggtgggcggcgagctgcgcacggacctcgccaaggagtacctg
atctccaagggcaagaacatcagcgtgcacgccggcgaccgcgtcaaggccggcgaggcg
ctcatggatggctcggccaacccgcacgacatcctcaaggtgctcggcgagaaggcgctc
gcgggctacctcgtggatgaggtgcaggaggtctaccggctgcagggcgtgaagatcaac
gacaagcacatcgaggtgatcgtccggcagatgctgcgccgcgtgcgcgtcaccgacgtg
ggcgacaccagcttcctcgtcgacgagcaggtcgagaagtgggtgttcgaggaggagaac
gagaaggtcatggccaacggtcagcgtccgggcgtcggtgagcccctgctgctcggcatc
accaaggcctcgctctccaccgagtcgttcatctccgcgtcgtccttccaggagaccacc
aaagtgctcaccgaggccgccatcaacggcaaggtggactacctgcgcggcctcaaggag
aacgtcatcatgggccgcctcatccccgccggtacgggcctgcccaactacaagcacctc
gacatcgaggtggagagccccgccgacgagatctccgagatggaggccgccctggccgcc
actcacggggacgacctcgtgccgcccctgtcctcgggcagccgctccgagggctcccag
agcagcggggcggcctag
DBGET
integrated database retrieval system
