Cystobacter fuscus: CYFUS_006544
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Entry
CYFUS_006544 CDS
T05065
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
cfus
Cystobacter fuscus
Pathway
cfus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CYFUS_006544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfus03021
]
CYFUS_006544
Transcription machinery [BR:
cfus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYFUS_006544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
DUF3782
HTH_11
HTH_59
Motif
Other DBs
NCBI-ProteinID:
ATB41082
UniProt:
A0A250JC77
LinkDB
All DBs
Position
complement(8228885..8229634)
Genome browser
AA seq
249 aa
AA seq
DB search
MATRTMKYGAEGLSHYLRHLGDHTQLTREQEYELAGRARKGDEAARQTLATSNLAFVVAV
AKKFANRGARLDDLIQEGNVGLMKAIEHFDPKKNVRFATYAVWWIRAYITRYLKDNRSQV
RGGEAERGSMMDFSLDASIDEEGETTFLDRLEDSGPSPQAIFLSREQDGEVQEALSKVRK
RIGDLGWDILQERLTQDKPRTLEELGQRWGVSRERVRQVELKTKNFLERYLAAFNQDEEF
DAVNPADAA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaggacgatgaagtacggagccgagggcctttcgcactatctgcgtcacctc
ggggatcacacgcagttgacccgggagcaggagtacgagctggctgggcgtgcccgcaag
ggcgatgaagcggcgcggcagacgctcgccacgagcaacctggcgttcgtggtggcggtg
gccaagaagttcgccaaccgtggggctcgcctggatgacctcatccaggagggcaacgtg
ggcttgatgaaggccatcgagcacttcgatccgaagaagaacgtgcgcttcgccacctac
gcggtgtggtggatccgcgcctacatcacccgctacctcaaggacaaccgcagccaggtg
cgcggcggcgaggccgagcgcggcagcatgatggacttctcgctcgacgcgagcatcgac
gaggaaggcgagacgaccttcctggatcggctggaggactcggggccgtcgccccaggcc
atcttcctgtcgcgcgagcaggatggggaggttcaggaggccctgtccaaggttcgcaag
cgcattggcgatctgggctgggacatcctccaggagcggctcacgcaggacaaaccgcgc
acgctcgaggagctgggccagcgctggggcgtgtcgcgcgagcgcgtgcggcaggtggag
ctcaagacgaagaacttcctcgagcgctacctggcggccttcaaccaggacgaggagttc
gacgccgtcaacccggccgacgccgcctga
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