KEGG   Cystobacter fuscus: CYFUS_006797
Entry
CYFUS_006797      CDS       T05065                                 
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
cfus  Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:cfus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cfus03016]
    CYFUS_006797
Enzymes [BR:cfus01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     CYFUS_006797
Transfer RNA biogenesis [BR:cfus03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    CYFUS_006797
 Prokaryotic type
   tRNA splicing ligases
    CYFUS_006797
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ATB41332
UniProt: A0A250JCX7
LinkDB
Position
complement(8545106..8546341)
AA seq 411 aa
MRTERDYEVLTNEAGGVPIKAWTVGVPFEDEAKKQLRAMAALPFVHKWVAVMPDVHRGFG
ATVGSVVATAGAVIPAAVGVDIGCGMIAVRTTLRAEQLPDLLGGVRSAIERAVPHGRTDN
GGRNDRGAWREAPAAHREAWGRLKPGYDAILEKHPRLGRGPDLGHLGTLGTGNHFIEVCL
DEADHVWVMLHSGSRGVGNRIGSHFIELAKEDMRRFFIQLPEADLAYLPEGSEHFEDYLR
AVGWAQEYAATNRELMLRSTVEALQASGELPEFSLTQAAVNCHHNYVSREHHYGKNVLVT
RKGAVRAREGDLGIIPGSMGARSYIVRGKGNAESFHSCSHGAGRVMSREAAKRRFTLEDH
ARATEGIECRKDADVIDETPGAYKPIDAVMQAQASLVDVVHTLRQVVCVKG
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgcggaccgagcgcgactacgaggtgctgacgaacgaggcgggtggggtgcccatcaag
gcgtggacggtgggggtgccgttcgaggacgaggcgaagaagcagcttcgggcgatggcg
gccctgcccttcgtgcacaagtgggtggcggtgatgccggacgtgcaccgcggcttcggc
gcgacggtgggcagcgtggtggcgacggcgggcgcggtgattccggccgcggtgggcgtg
gatatcggctgcgggatgatcgccgtgcgcaccacgctgcgcgcggagcagttgccggac
ttgctcggcggggtgcgctcggccatcgagcgcgcggtgccgcacggccgcaccgacaac
gggggtcgcaatgaccggggtgcctggagggaggcgcccgcggcgcaccgcgaggcctgg
ggccgcctgaagcccggctatgacgccatcctggagaagcacccgcgcctgggccggggc
ccggacctgggacacctcgggacgctgggaacgggaaaccacttcatcgaggtgtgtctg
gatgaggcggaccacgtctgggtgatgctgcacagcggctcgcgcggggtgggcaaccgc
atcggcagccacttcatcgagctggccaaggaggacatgcgccgcttcttcatccagttg
ccggaggcggacctggcgtacctgcccgagggctccgagcacttcgaggactacctgcgc
gcggtgggttgggcgcaggagtacgcggcgaccaaccgcgagttgatgctgcgctcgacc
gtggaggcgttgcaggcgagcggggagctgccggagttctcgctcacgcaggcggcggtg
aactgccaccacaactacgtgtcgcgcgagcaccactacggcaagaacgtgctggtgacg
cgcaagggggcggtgcgggcgcgcgagggcgacctgggcatcatccccgggagcatgggg
gcacgctcgtacatcgtgcgtgggaaggggaacgcggagtccttccactcgtgcagccac
ggcgcgggccgggtgatgtcgcgcgaggcggccaagcggcgcttcacgctggaggaccac
gcgcgggcgacggagggcatcgagtgccgcaaggacgcggacgtcatcgacgagacgccc
ggggcctacaagcccatcgacgcggtgatgcaggcgcaggcgagcctggtcgacgtcgtc
cacacgctgcggcaggtggtgtgcgtgaaggggtga

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