Cystobacter fuscus: CYFUS_007632
Help
Entry
CYFUS_007632 CDS
T05065
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus00040
Pentose and glucuronate interconversions
cfus01100
Metabolic pathways
cfus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CYFUS_007632
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYFUS_007632
Enzymes [BR:
cfus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CYFUS_007632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RicinB_lectin_2
Pectate_lyase_4
Ricin_B_lectin
CDtoxinA
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
ATB42155
UniProt:
A0A250JE40
LinkDB
All DBs
Position
complement(9558233..9559855)
Genome browser
AA seq
540 aa
AA seq
DB search
MRGAASRLFLLSLVGAMTPGCGESPAEGGLDEALGGVVEALSVDTSKTYNLVGVGSDKCV
QPKGGSTGAGTDAVISTCSGGVAQRFEFLAQSGGYYSIKNVSSGLCLDVTDASTSSGALI
KQWSCSGGTYQQFLIEDTGEGTVKLVARHSGLVMDVIGGATSNGAGLQQWGWSGSTNQKF
KLVASGTSGGGGSDPCSISLSDKPDGFAAQSGGTTGGGSASPIQVTTTSQLKQYLEDGQA
RVLHIMNDLDFRTAARTVSGCEKKASCDSMGKAIKEFRVSSTCNSDEVTSTRTRNETTIN
VKSNKTVIGMGDGVSLRGVSFNLGNQENLIFRNLDIRDVNPGLIEAGDGFTLTSSKHVWI
DHCSFALISDGYLDVGTTASETSTHPDYITLSWSYIDGRTPYQCGGQHSFVNFANNAKMT
WHHNWYDNSSGRNPKLGGALMQAHLYNNYWLNTSYFCITAAENAQARVESNYFENASKPH
WLQAPGAIAIDSGNVYTGKSSSSSRDVGGSVFSVPYSYTKDSGTAAKDRVKACSGPRRIQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggagcagcttctcgcttgtttctgctgtctctcgtgggggcgatgacaccgggc
tgcggggagtcccccgcggagggcgggttggacgaggccctcggaggcgtcgtcgaggcg
ctctccgtcgataccagcaagacgtacaacctcgtcggagtgggcagcgacaagtgtgta
cagcccaagggcgggagtacgggcgctggtacggatgcggtgatctcgacctgcagcggg
ggcgttgcccagcggttcgagttcctcgcgcagtcgggcggctactacagcatcaagaat
gtctccagtggcctgtgtctcgacgtcacggatgcctcgacgagcagcggcgccctgatc
aagcagtggtcctgttcgggcgggacctaccagcagttcctgatcgaggacaccggcgaa
gggacggtgaagctggtggctcggcacagcggcctggtgatggacgtcattgggggggcg
acgagcaacggggcggggctccagcagtggggttggagtgggtcgacgaaccagaagttc
aagctggtggccagcggcacgagtggtggtggtggtagcgatccctgctccatctccctc
tccgataaacccgatggcttcgccgcccaatcaggaggcaccacggggggaggaagcgcc
tccccgatccaggtcacgacgacaagtcagctcaagcagtacctggaggatggccaggca
cgcgtgctccacatcatgaatgacctggacttcaggaccgcggctcgcaccgtgtcggga
tgcgagaagaaggcgtcctgtgactccatgggcaaggccatcaaggagttccgggtttcg
agcacctgcaactcggacgaggtgacgtccacccgtacgcgcaacgagaccaccatcaac
gtcaagtcgaacaagacggtgatcggcatgggtgacggcgtcagtcttcgcggagtgtcg
ttcaacctcggaaaccaggagaacttgatcttccgcaacctcgacatccgcgacgtgaac
ccaggcctcatcgaggcgggtgacggattcacgctcacctcgtcgaagcacgtgtggatc
gatcactgctcgttcgcgctcatcagcgatggctacctcgacgttggcaccacggcctcc
gagaccagtacccatcccgactacatcacgctctcgtggagctacatcgatgggcggact
ccgtaccagtgtggtggtcagcacagcttcgtgaacttcgccaacaacgcgaagatgacc
tggcaccacaactggtacgacaacagctcgggaagaaacccgaagctcggcggcgcgctg
atgcaggcccacctctacaacaattactggctcaacacgtcctacttctgcatcaccgcc
gcggagaatgcgcaagctcgcgtcgagagcaactacttcgagaacgcgagcaagccgcat
tggcttcaggctccgggcgcgatcgccatcgacagtgggaacgtctataccggcaagtcg
tcgtccagctcccgggacgttggcggcagcgtgttctccgtcccctactcgtacaccaag
gacagtggcacggccgcgaaggaccgcgtcaaggcgtgctccggaccgcggcggattcag
tag
DBGET
integrated database retrieval system
