Cystobacter fuscus: CYFUS_007728
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Entry
CYFUS_007728 CDS
T05065
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfus
Cystobacter fuscus
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfus03016
]
CYFUS_007728
Enzymes [BR:
cfus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CYFUS_007728
Transfer RNA biogenesis [BR:
cfus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CYFUS_007728
Prokaryotic type
CYFUS_007728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATB42250
UniProt:
A0A250JF77
LinkDB
All DBs
Position
complement(9672783..9673652)
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AA seq
289 aa
AA seq
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MDGVLVIDKPKGPTSFDVVRQVRGLLRVKKVGHTGTLDPMATGVLPLCLGEATKVAGFIT
EGDKAYDAVVRLGAETDTQDAEGKVVAEAPVPPLTASLLEDVLGRFRGTFEQVPPMYSAV
KVGGKRLYELARAGEEVERASRQVTVYELVLRDFNATQLRLSVRCSKGFFVRTLAYDLGR
ALGCGAHLEALRRTASGPFSLTHALPLADVPALVREPEALVRRLLPVSEALVDLPAVLVS
AADAERVSHGVPVEAPSHPGRVRVVGPSGVLLAVAEVVRGRLRYLRVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtgctggtcatcgacaagcccaagggccccacgtcgttcgacgtggttcga
caggtacgtggtctgctccgggtgaagaaggtgggccataccggcacgctggatcccatg
gcgaccggggtgctgcccctgtgcctgggggaagccaccaaggtggcgggcttcatcacc
gagggcgacaaggcctatgacgccgtggtgcgcctgggcgcggagacggacacgcaggac
gccgagggcaaggtggtcgccgaggcgcccgtgcccccgctcaccgcctcgttgctcgag
gacgtgctcggccgcttccggggcaccttcgagcaggtgccgcccatgtattcggcggtg
aaggtgggcggcaagcggctgtacgagctggcccgcgcgggtgaggaggtggagcgcgcc
agccgccaggtgacggtgtacgagctggtgctgcgcgacttcaacgccacccagctgcgc
ctgtccgtgcgctgctccaagggtttcttcgtgcgcacgctcgcctatgacctgggccgg
gcgctcggctgcggagcccatctggaggcgctgcggcgcaccgcgagcgggcccttctcc
ctcacccacgcgctccccctggcggacgtgcccgcgctggtgcgcgagcccgaggccctg
gtgcggcgcctgttgcccgtgtccgaggcgctcgtggacctgcccgcggtgctggtgagc
gcggcggacgcggagcgggtgtcccatggggtgcccgtcgaggccccctcgcatccgggc
cgggtgcgcgtggtgggaccctcgggcgtgctgctcgcggtggccgaggtggtccgcggc
cggctgcgctacctgcgtgtgctcgtctag
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