Cystobacter fuscus: CYFUS_008663
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Entry
CYFUS_008663 CDS
T05065
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus00040
Pentose and glucuronate interconversions
cfus01100
Metabolic pathways
cfus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CYFUS_008663
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYFUS_008663
Enzymes [BR:
cfus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CYFUS_008663
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ATB43183
UniProt:
A0A250JHS4
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All DBs
Position
10791614..10793188
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AA seq
524 aa
AA seq
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MRLRSQKQGVVSSAVFLAVALASACGGADSPVTAYDTDSALSAASAPLAVIDAKTLTDTT
APLLLPLSGTRTYSAPVETSSGHEPSNYKAAPVVPSIVPAKSDPTGGVLTFERETAPLEG
WHAWARDGAAGKHRQVLVSGGSSAAANRIYTVYTKEQLVNAIREARNEPKIIRVVGHIDF
RVDGGVFKEYTSYDDLKSGGSLFIPSNTTLVGIKDANGKPARISGTQLLIGNENANFEVD
FKAWVAAGKNPDAFPGWTRNVIVRNLAIDTMWDVNPEDSSNAYADGICVAWAQNVWIDHI
TLTDLPTPSSMSSDTRHDGGLDVVRGSDYVTISNSYFTIHGKTTLVGNSDAGRQWSDEGR
LHVTFTGNHWEGVNSRTPRVRYGQVHIYNNLVTGDTNPSAANGTIPAGAAASDVKFESAI
GVGYKADILAENNYYNMKTLKPKEVCGKLVTDHGKGVSFRSSGARFISNKDDAGKPMTAT
IDVQLQGCDGIPVANLWSPPYSYTLKTADTAKTAVLANVGAGKL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagattgagatcccagaagcagggagtggtgtcttcggctgtgtttctggcggtagcc
ctggcgtcagcctgtggaggagccgacagtcctgtcacggcctacgacacggacagcgcg
ctgagcgccgcctccgcgcccctggcagtgattgacgcgaagaccctgacggacaccacg
gcaccgctgctgctgccgctgtctgggacccggacctacagcgctccggtcgagacgtcg
agcgggcatgagccctccaattacaaggcggcgcccgtggtgccgagcatcgtgccggcc
aagagcgatccgacaggaggcgtgctgaccttcgagcgagaaacggcgccgctggaaggg
tggcatgcctgggcccgtgacggagcggctggcaagcatcgccaggtgctggtctccggc
ggttcctcggcggcggccaaccgtatctacaccgtgtacaccaaggagcagctggtcaat
gccatccgcgaggccaggaacgagcccaagatcatccgggtggtcgggcacatcgacttc
cgggtggatggtggcgtgttcaaggaatacaccagctatgacgacctgaagagtggcggc
tccctcttcattccgtccaacaccacgctcgtgggaatcaaggacgcgaatggcaagccc
gccaggatttccggtacgcagctcttgatcggcaacgagaacgccaacttcgaggtggac
ttcaaggcctgggtggcggcgggaaagaacccggatgccttcccgggttggacccgcaac
gtcatcgtccgcaacctggccatcgacaccatgtgggacgtgaacccggaggattcatcc
aacgcctatgccgacggcatctgcgtcgcctgggcccagaacgtctggatcgatcacatc
accctgacggatctcccgaccccgtcgtccatgtcctcggatacccgccatgacggaggc
ctggacgtggtgcgtggctccgactacgtcaccatctccaacagctacttcaccatacac
ggcaagacgaccctggtgggcaacagcgatgccgggcggcagtggagcgatgagggccgc
ctccacgtcaccttcaccggcaaccactgggagggcgtgaacagccggacgccgcgcgtg
cgctatggccaggtgcacatctacaacaacctggtgacgggtgacaccaacccgagtgcc
gccaatggcaccattcccgccggagcggccgcgtcggacgtcaagttcgagagcgccatc
ggcgtgggctacaaggccgacatcctggcggagaacaactactacaacatgaagaccctc
aagccgaaggaggtctgcggcaagctcgtgaccgatcacggcaagggggtgagcttccgc
agcagcggggcccgcttcatcagcaacaaggacgacgccggcaagcccatgacggccacg
atcgacgtgcagttgcagggctgcgatggcattccggtggccaacctctggagcccgccc
tacagctacacgctgaagacggcggacaccgccaagaccgcggtcctggcgaacgtcggc
gcgggcaagctgtag
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